RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 NRKQ7Z2Y5 1582 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 CEP55Q53EZ4 464 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 ZBED8Q8IZ13 594 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 ZNF555Q8NEP9 628 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 C7orf25Q9BPX7 421 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 TUBE1Q9UJT0 475 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 FIS1Q9Y3D6 152 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 DAB1O75553 588 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 MECOMQ03112 1051 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 RASGRF1Q13972 1273 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 PTPN21Q16825 1174 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 AASDHQ4L235 1098 aaPredicted RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 NYAP1Q6ZVC0 841 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 DDI1Q8WTU0 396 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CYFIP2Q96F07 1278 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 RNF17Q9BXT8 1623 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 TRIM49BA6NDI0 452 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 CHN1P15882 459 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CDC25AP30304 524 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 KRT17Q04695 432 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SLC12A1Q13621 1099 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 UGP2Q16851 508 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 C4orf50Q6ZRC1 276 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 LCA5Q86VQ0 697 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 HIPK4Q8NE63 616 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 LRRC1Q9BTT6 524 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 ORC4O43929 436 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 KCNA3P22001 575 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SIK1P57059 783 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 DYNLL1P63167 89 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 KDM7AQ6ZMT4 941 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CYFIP1Q7L576 1253 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 NLGN1Q8N2Q7 840 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 AIFM3Q96NN9 605 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 L2HGDHQ9H9P8 463 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 GEMIN8Q9NWZ8 242 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 WDR35Q9P2L0 1181 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SLC9A2Q9UBY0 812 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 TRPC1P48995 793 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 DEFA1P59665 94 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 DEFA3P59666 94 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CACNB1Q02641 598 aaPredicted RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 PPM1NQ8N819 430 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 TNIP2Q8NFZ5 429 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 TUFT1Q9NNX1 390 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 PNPLA7Q6ZV29 1317 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SPDYE2BA6NHP3 402 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SPDYE6P0CI01 402 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SDC4P31431 198 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 MCAMP43121 646 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 IRAK1P51617 712 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 RAP1GDS1P52306 607 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 NCAPHQ15003 741 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SFR1Q86XK3 245 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 GSPT2Q8IYD1 628 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 KRT35Q92764 455 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 MPP6Q9NZW5 540 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 COPG1Q9Y678 874 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 ABCB11O95342 1321 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 UBAP1LF5GYI3 381 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 CLDN3O15551 220 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 ABL1P00519 1130 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 FDX1P10109 184 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 NPR1P16066 1061 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 VHLP40337 213 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 SPOUT1Q5T280 376 aaKnown RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 STX19Q8N4C7 294 aa10.14□□□□□ -0.79
SNX1-202ENST00000380285 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
SNX1-202ENST00000380285 PRLRP16471 622 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 GNA15P30679 374 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 EPHB1P54762 984 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 EDRF1Q3B7T1 1238 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 MRPL1Q9BYD6 325 aaKnown RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 RABGAP1LQ5R372 815 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PCYOX1LQ8NBM8 494 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 TTLL11Q8NHH1 800 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 LZICQ8WZA0 190 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 VPS11Q9H270 941 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 TEX33O43247 280 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PRKAB2O43741 272 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 CD58P19256 250 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 OSBPP22059 807 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 MAP4P27816 1152 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms