RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PMS1P54277 932 aaKnown RBP19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 GYS2P54840 703 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 FAM71BQ8TC56 605 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 CBWD1Q9BRT8 395 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 KIAA1683Q9H0B3 1180 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 OATP04181 439 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 SCP2P22307 547 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 ATP11AP98196 1134 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 PPP1R2P3Q6NXS1 205 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 RBM43Q6ZSC3 357 aaKnown RBP19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 RUNDC3BQ96NL0 473 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 ZNF131P52739 623 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 ZSCAN26Q16670 478 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 ATP2A3Q93084 1043 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 IFT122Q9HBG6 1241 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 ANKEF1Q9NU02 776 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 FMN2Q9NZ56 1722 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 MIF4GDA9UHW6 222 aaKnown RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 GOLGA8KD6RF30 607 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 VIL1P09327 827 aaKnown RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 ERAP1Q9NZ08 941 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 SLC16A3O15427 465 aaKnown RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 CLCN3P51790 818 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 NLRP11P59045 1033 aaKnown RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 MKRN4PQ13434 485 aaPredicted RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 CBWD2Q8IUF1 395 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 GIMAP7Q8NHV1 300 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 GABPB2Q8TAK5 448 aaPredicted RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 RFFLQ8WZ73 363 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 MS4A14Q96JA4 679 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 FHDC1Q9C0D6 1143 aaPredicted RBP19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 SLC4A1P02730 911 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 WEE2P0C1S8 567 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 NCAPHQ15003 741 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 C4orf50Q6ZRC1 276 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 TIPINQ9BVW5 301 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 CYP26B1Q9NR63 512 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 SMARCAL1Q9NZC9 954 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 MON2Q7Z3U7 1717 aa19.19■□□□□ 0.66
PTPDC1-202ENST00000375360 A6NNZ2 444 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 TUBB8Q3ZCM7 444 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 FAM102AQ5T9C2 384 aaPredicted RBP19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 KCNK18Q7Z418 384 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 OPTNQ96CV9 577 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 USP20Q9Y2K6 914 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 CCDC188H7C350 402 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 VWA5AO00534 786 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 CRCPO75575 148 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 CNTN2Q02246 1040 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 ZBED1O96006 694 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 INHBAP08476 426 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 CYP2C9P11712 490 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 PDE1BQ01064 536 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 DGKZQ13574 1117 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 MOXD1Q6UVY6 613 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 SCFD1Q8WVM8 642 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 RILPQ96NA2 401 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 PXMP2Q9NR77 195 aa19.18■□□□□ 0.66
PTPDC1-202ENST00000375360 I3L4J1 428 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 RWDD4Q6NW29 188 aaKnown RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 SLIT3O75094 1523 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 HLA-DRAP01903 254 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 HP1BP3Q5SSJ5 553 aaPredicted RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 PNMA5Q96PV4 448 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 GINM1Q9NU53 330 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 ITIH6Q6UXX5 1313 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 ANKRD20A3Q5VUR7 823 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 ELOA2Q8IYF1 753 aaPredicted RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 SPATC1LQ9H0A9 340 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 TBX20Q9UMR3 447 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 IGSF9BQ9UPX0 1349 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 EML1O00423 815 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 PDGFRBP09619 1106 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 ZKSCAN8Q15776 578 aaPredicted RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 ARHGEF18Q6ZSZ5 1173 aa19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 NOVA2Q9UNW9 492 aaKnown RBP19.17■□□□□ 0.66
PTPDC1-202ENST00000375360 SPDYE16A6NNV3 312 aaPredicted RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 PI4K2BG5E9Z4 385 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 GIPC1O14908 333 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 CALB1P05937 261 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 HERVK_113P62684 666 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 MUM1L1Q5H9M0 696 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 TEX2Q8IWB9 1127 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 SPATA4Q8NEY3 305 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 INTS9Q9NV88 658 aaKnown RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 KLHL11Q9NVR0 708 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 AMACRQ9UHK6 382 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 CPA4Q9UI42 421 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 GOLGA8MH3BSY2 632 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 HBP1O60381 514 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 SDC4P31431 198 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 NPTX2P47972 431 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 RGS7P49802 495 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms