RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 XPNPEP1Q9NQW7 623 aa15.39■□□□□ 0.05
CXCL12-202ENST00000374426 PDRG1Q9NUG6 133 aa15.39■□□□□ 0.05
CXCL12-202ENST00000374426 PRG3Q9Y2Y8 225 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-202ENST00000374426 IPPQ9Y573 584 aa15.39■□□□□ 0.05
CXCL12-202ENST00000374426 EP300Q09472 2414 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-202ENST00000374426 C2orf16Q68DN1 1984 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 DCHS1Q96JQ0 3298 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 INPPL1O15357 1258 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 TEX28O15482 410 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 ASAP2O43150 1006 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 TSPAN1O60635 241 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 N4BP1O75113 896 aaKnown RBP15.38■□□□□ 0.05
CXCL12-202ENST00000374426 EFEMP2O95967 443 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 URODP06132 367 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 ITGA4P13612 1032 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 NBL1P41271 181 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 AK2P54819 239 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 CYP4A11Q02928 519 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 DSC1Q08554 894 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 TDGQ13569 410 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 CTTNQ14247 550 aaKnown RBP15.38■□□□□ 0.05
CXCL12-202ENST00000374426 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 EARS2Q5JPH6 523 aaKnown RBP15.38■□□□□ 0.05
CXCL12-202ENST00000374426 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 OTUD6AQ7L8S5 288 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 RNF168Q8IYW5 571 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-202ENST00000374426 CNNM3Q8NE01 707 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 CMASQ8NFW8 434 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-202ENST00000374426 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 HERC2P3Q9BVR0 1158 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 KCNK12Q9HB15 430 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 MAN1C1Q9NR34 630 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 HES2Q9Y543 173 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 STK36Q9NRP7 1315 aa15.38■□□□□ 0.05
CXCL12-202ENST00000374426 FAM205CA6NFA0 338 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 ARL5CA6NH57 179 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 F8W810 466 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 CDKL5O76039 1030 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 ERLIN2O94905 339 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 NPR3P17342 541 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 MLH1P40692 756 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 OR1G1P47890 313 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 PTENP60484 403 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 PCBP1Q15365 356 aaKnown RBP eCLIP15.37■□□□□ 0.05
CXCL12-202ENST00000374426 KIAA0319Q5VV43 1072 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 FLCNQ8NFG4 579 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 CPB2Q96IY4 423 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 SNX27Q96L92 541 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 ZFP42Q96MM3 310 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 GAD1Q99259 594 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 MTRQ99707 1265 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 DUSP12Q9UNI6 340 aa15.37■□□□□ 0.05
CXCL12-202ENST00000374426 FRYLO94915 3013 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 PRR23AA6NEV1 266 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 PI15O43692 258 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 MARCH6O60337 910 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 SLITRK3O94933 977 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 ADH1AP07327 375 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 XBP1P17861 261 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 AOC1P19801 751 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 AXLP30530 894 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 GLUD2P49448 558 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 SCNN1GP51170 649 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-202ENST00000374426 AMHR2Q16671 573 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 NOTUMQ6P988 496 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-202ENST00000374426 TPH2Q8IWU9 490 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 SLFN12Q8IYM2 578 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 NAP1L4Q99733 375 aaKnown RBP15.36■□□□□ 0.05
CXCL12-202ENST00000374426 CSRNP2Q9H175 543 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 RXFP1Q9HBX9 757 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 MIOSQ9NXC5 875 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 SSX2IPQ9Y2D8 614 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 ARID2Q68CP9 1835 aa15.36■□□□□ 0.05
CXCL12-202ENST00000374426 CCDC195A0A1B0GUA6 201 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 RFPL2O75678 378 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 CTDNEP1O95476 244 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 GLUD1P00367 558 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 MYBP10242 640 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 DSG1Q02413 1049 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 MBTD1Q05BQ5 628 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 NR5A1Q13285 461 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 CAPSQ13938 189 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 FRMD5Q7Z6J6 570 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 ASAP3Q8TDY4 903 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 HSD17B14Q9BPX1 270 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 EIF2AK1Q9BQI3 630 aaKnown RBP15.35■□□□□ 0.05
CXCL12-202ENST00000374426 RHOBTB2Q9BYZ6 727 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
CXCL12-202ENST00000374426 WDR6Q9NNW5 1121 aaKnown RBP15.35■□□□□ 0.05
CXCL12-202ENST00000374426 CHST7Q9NS84 486 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 IGSF9Q9P2J2 1179 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 TPCN1Q9ULQ1 816 aa15.35■□□□□ 0.05
CXCL12-202ENST00000374426 NARSO43776 548 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms