RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 KIF2BQ8N4N8 673 aa18.62■□□□□ 0.57
LDLRAP1-201ENST00000374338 SYT2Q8N9I0 419 aaPredicted RBP18.62■□□□□ 0.57
LDLRAP1-201ENST00000374338 ADAM22Q9P0K1 906 aa18.62■□□□□ 0.57
LDLRAP1-201ENST00000374338 WDR35Q9P2L0 1181 aa18.62■□□□□ 0.57
LDLRAP1-201ENST00000374338 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 UCHL3P15374 230 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 COPB2P35606 906 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 COBLL1Q53SF7 1204 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 SELENOSQ9BQE4 189 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 ISCUQ9H1K1 167 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 ASTN1O14525 1302 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 UBOX5O94941 541 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 KRT16P08779 473 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 ABCB4P21439 1286 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 PON1P27169 355 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 CNGA1P29973 690 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 SREBF1P36956 1147 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 CUL3Q13618 768 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 LLGL1Q15334 1064 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 ARHGAP44Q17R89 818 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 EXOC3L4Q17RC7 722 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 CENPTQ96BT3 561 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 LRRC45Q96CN5 670 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 SYT15Q9BQS2 421 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
LDLRAP1-201ENST00000374338 SERPING1P05155 500 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 IMPDH2P12268 514 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 MAGEA8P43361 318 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 HYIQ5T013 277 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ELAC2Q9BQ52 826 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 GANQ9H2C0 597 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ATP8A1Q9Y2Q0 1164 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 FOCADQ5VW36 1801 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 GRID2IPA4D2P6 1211 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 SART1O43290 800 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 FAM13AO94988 1023 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 DHX9Q08211 1270 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 CC2D2BQ6DHV5 1058 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■■■■■ 53.2
LDLRAP1-201ENST00000374338 SIPA1L1O43166 1804 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 RBAK-RBAKDNI3L0D1 243 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 SHBGP04278 402 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ALDH3A1P30838 453 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 CCDC38Q502W7 563 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 LRRC23Q53EV4 343 aaPredicted RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 IL31RAQ8NI17 732 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 PSMD1Q99460 953 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 ECT2Q9H8V3 914 aa18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 CNOT10Q9H9A5 744 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
LDLRAP1-201ENST00000374338 IGLV3-22A0A075B6J6 115 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 CYP3A7-CYP3A51PA0A087WV96 503 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 TGFB1I1O43294 461 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 GAS7O60861 476 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 EGFRP00533 1210 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 CYP3A7P24462 503 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 LRRC34Q8IZ02 419 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 TRIM4Q9C037 500 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 SERPINA10Q9UK55 444 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 STK38LQ9Y2H1 464 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 ZSCAN9O15535 394 aaPredicted RBP18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 TTI1O43156 1089 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 LCA5LO95447 670 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 PRAMEF18Q5VWM3 479 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 ANKRD27Q96NW4 1050 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 ACP6Q9NPH0 428 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 PCMTD2Q9NV79 361 aa18.59■□□□□ 0.57
LDLRAP1-201ENST00000374338 MRPS35P82673 323 aaKnown RBP18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 AP3B2Q13367 1082 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 SLC18A3Q16572 532 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 MEI1Q5TIA1 1274 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 TRIM51Q9BSJ1 452 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 WDR11Q9BZH6 1224 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 LRRC42Q9Y546 428 aa18.58■□□□□ 0.57
LDLRAP1-201ENST00000374338 NFIBO00712 420 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 PJA2O43164 708 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 CHN1P15882 459 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 SP4Q02446 784 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 MTA1Q13330 715 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 DLGAP5Q15398 846 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 RBM12BQ8IXT5 1001 aaKnown RBP18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 KLHL29Q96CT2 875 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 ZNF577Q9BSK1 485 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 UNC45AQ9H3U1 944 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 SAMD15Q9P1V8 674 aa18.58■□□□□ 0.56
LDLRAP1-201ENST00000374338 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
LDLRAP1-201ENST00000374338 MSH2P43246 934 aa18.57■□□□□ 0.56
LDLRAP1-201ENST00000374338 TNNC1P63316 161 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms