RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 GNA14O95837 355 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 FOCADQ5VW36 1801 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 MED24O75448 989 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 RBBP8NLQ8NC74 664 aaPredicted RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 SERPINB12Q96P63 405 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 HIP1RO75146 1068 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 BRAFP15056 766 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 KLC1Q07866 573 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 PDCD2Q16342 344 aaPredicted RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 NCSTNQ92542 709 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 METTL5Q9NRN9 209 aaKnown RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 MAML1Q92585 1016 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 CADM1Q9BY67 442 aaKnown RBP12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 DNAJC18Q9H819 358 aa12.53□□□□□ -0.4
SMARCA1-201ENST00000371121 TGFB1I1O43294 461 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 TBX10O75333 385 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 IL2RBP14784 551 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 CHRNA3P32297 505 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 IGHMBP2P38935 993 aaKnown RBP12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 NOVP48745 357 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 DNAJC3Q13217 504 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 TAOK1Q7L7X3 1001 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 LMO3Q8TAP4 145 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 WDR60Q8WVS4 1066 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 INPP5DQ92835 1189 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 LGALS13Q9UHV8 139 aa12.52□□□□□ -0.4
SMARCA1-201ENST00000371121 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 STARD3NLO95772 234 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 KRT13P13646 458 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 STAT3P40763 770 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 NEK3P51956 506 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 KYNUQ16719 465 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 UBE2SQ16763 222 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 TBK1Q9UHD2 729 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 NAALADL1Q9UQQ1 740 aa12.52□□□□□ -0.41
SMARCA1-201ENST00000371121 TCEA3O75764 348 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 KRT36O76013 467 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ANXA13P27216 316 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 SOX5P35711 763 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ARHGAP22Q7Z5H3 698 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 TTC4O95801 387 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 PCK1P35558 622 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 COG2Q14746 738 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 SCG3Q8WXD2 468 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 PTCD3Q96EY7 689 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
SMARCA1-201ENST00000371121 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms