RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 PCDH18Q9HCL0 1135 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 FKBP14Q9NWM8 211 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 ITGB1BP2Q9UKP3 347 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 BZW2Q9Y6E2 419 aaKnown RBP8.09□□□□□ -1.11
BRCC3-203ENST00000369459 FAM237AA0A1B0GTK4 181 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 A0A1W2PRG0 241 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 GOLGA6L4A6NEF3 574 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 LAD1O00515 517 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 ACSL4O60488 711 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 MCM3P25205 808 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
BRCC3-203ENST00000369459 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-203ENST00000369459 STAT2P52630 851 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 B2MP61769 119 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 FKBP1BP68106 108 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 SEMA3AQ14563 771 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 TADA2BQ86TJ2 420 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 FCHSD1Q86WN1 690 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
BRCC3-203ENST00000369459 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
BRCC3-203ENST00000369459 TRIM58Q8NG06 486 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 MTUS1Q9ULD2 1270 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 EDARQ9UNE0 448 aa8.09□□□□□ -1.11
BRCC3-203ENST00000369459 ASTN2O75129 1339 aaPredicted RBP8.09□□□□□ -1.12
BRCC3-203ENST00000369459 BTBD18B2RXH4 712 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ZEB2O60315 1214 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 RASGRP1O95267 797 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 POU3F3P20264 500 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PBLDP30039 288 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ETV3P41162 512 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 LIMK1P53667 647 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 CLNS1AP54105 237 aaKnown RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PLTPP55058 493 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 MAP3K9P80192 1104 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 SKOR1P84550 965 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 GHRHRQ02643 423 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 BEND6Q5SZJ8 279 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 TRIM68Q6AZZ1 485 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 IL31Q6EBC2 164 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 SLC30A9Q6PML9 568 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ZNF600Q6ZNG1 722 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 MIGA2Q7L4E1 593 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 SHISA4Q96DD7 197 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 SPDL1Q96EA4 605 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 FERD3LQ96RJ6 166 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 USP28Q96RU2 1077 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PIGSQ96S52 555 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 HESX1Q9UBX0 185 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 FAM184BQ9ULE4 1060 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PNMA8BQ9ULN7 279 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ZNF711Q9Y462 761 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 LOXHD1Q8IVV2 1947 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ENPP3O14638 875 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ABLIM1O14639 778 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 USP2O75604 605 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 GOLGA8HP0CJ92 632 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PTPRAP18433 802 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 CHKAP35790 457 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 MLLT3P42568 568 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PDE6CP51160 858 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ADCY7P51828 1080 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 NAPAP54920 295 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 CBX3Q13185 183 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 AP3B2Q13367 1082 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PTPAQ15257 358 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 OTUD7BQ6GQQ9 843 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 HEATR3Q7Z4Q2 680 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 CDAN1Q8IWY9 1227 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 SPATA18Q8TC71 538 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ALS2CR12Q96Q35 445 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 GORASP1Q9BQQ3 440 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 TEX13BQ9BXU2 312 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 CCSER2Q9H7U1 834 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 KCNJ14Q9UNX9 436 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 ABCB11O95342 1321 aa8.08□□□□□ -1.12
BRCC3-203ENST00000369459 FRMPD2Q68DX3 1309 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-203ENST00000369459 TRAV6A0A075B6T7 132 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 SCAMP3O14828 347 aaKnown RBP8.07□□□□□ -1.12
BRCC3-203ENST00000369459 CUTAO60888 179 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 ADAMTS4O75173 837 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 IVLP07476 585 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
BRCC3-203ENST00000369459 NEK3P51956 506 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 PMS2P54278 862 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 OAZ1P54368 228 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 BACE1P56817 501 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 GJA9P57773 515 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 C21orf58P58505 322 aa8.07□□□□□ -1.12
BRCC3-203ENST00000369459 ROR2Q01974 943 aaKnown RBP8.07□□□□□ -1.12
BRCC3-203ENST00000369459 LRRC74AQ0VAA2 488 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms