RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 OTOP1Q7RTM1 612 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 RFX6Q8HWS3 928 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CASKIN2Q8WXE0 1202 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 BTBD6Q96KE9 485 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 SLITRK6Q9H5Y7 841 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 KCNMB3Q9NPA1 279 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 KLHL11Q9NVR0 708 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 FAM169AQ9Y6X4 670 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ADAMTSL3P82987 1691 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 TRIM66O15016 1216 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 GNA15P30679 374 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ALDH3A1P30838 453 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 CXCL9Q07325 125 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 CCDC6Q16204 474 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 CCDC38Q502W7 563 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SLFN12LQ6IEE8 588 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 APTXQ7Z2E3 356 aaKnown RBP9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 H7C0C1 242 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 PODXLO00592 558 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SLC26A4O43511 780 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 RTN2O75298 545 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 COMTP21964 271 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SCP2P22307 547 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 FGFR4P22455 802 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ATP5OP48047 213 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 PMS2P54278 862 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 TFDP1Q14186 410 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 C7orf31Q8N865 590 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF280CQ8ND82 737 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ARL8AQ96BM9 186 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 DIS3Q9Y2L1 958 aaKnown RBP9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SPEF2Q9C093 1822 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 PRKCEQ02156 737 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SLMAPQ14BN4 828 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SEZ6Q53EL9 994 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ERICH1Q86X53 443 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 RHPN2Q8IUC4 686 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 CREG2Q8IUH2 290 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 SLC20A1Q8WUM9 679 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 TEX13BQ9BXU2 312 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 KCND2Q9NZV8 630 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 FZD1Q9UP38 647 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 USP20Q9Y2K6 914 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 ABCC6O95255 1503 aa9.06□□□□□ -0.96
PTPRK-206ENST00000368215 PHRF1Q9P1Y6 1649 aaKnown RBP9.06□□□□□ -0.96
PTPRK-206ENST00000368215 PI4K2BG5E9Z4 385 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 TLR3O15455 904 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 TMEM253P0C7T8 217 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 MAPK6Q16659 721 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 CDO1Q16878 200 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 CCDC197Q8NCU1 140 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 PSMD1Q99460 953 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 TRAF3IP3Q9Y228 551 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 DGAT1O75907 488 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 SGPL1O95470 568 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 RFX1P22670 979 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF131P52739 623 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 EIF3BP55884 814 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 SLC8A3P57103 927 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 TTC16Q8NEE8 873 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 TOPORSQ9NS56 1045 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 HACL1Q9UJ83 578 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 F8VZ95 297 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 GOLGA8MH3BSY2 632 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 MMEP08473 750 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 CLTAP09496 248 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 CHRNA3P32297 505 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 MAN1A1P33908 653 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 YWHAGP61981 247 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 BASP1P80723 227 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 Q3C1V9 767 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 DPP9Q86TI2 863 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 BAP1Q92560 729 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 MKL1Q969V6 931 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 FAM81BQ96LP2 452 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 HESX1Q9UBX0 185 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 A0A087WUV0 522 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 ITGA4P13612 1032 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF568Q3ZCX4 644 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 KIAA1755Q5JYT7 1200 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 OR6B2Q6IFH4 312 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 EFCAB13Q8IY85 973 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 RNF169Q8NCN4 708 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 MOV10L1Q9BXT6 1211 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
PTPRK-206ENST00000368215 KLHL14Q9P2G3 628 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 ROBO3Q96MS0 1386 aa9.05□□□□□ -0.96
PTPRK-206ENST00000368215 SEC24CP53992 1094 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 LRRC14Q15048 493 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 FAM133BQ5BKY9 247 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 NBPF12Q5TAG4 269 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 MEI1Q5TIA1 1274 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms