RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 NECTIN1Q15223 517 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 LRRC53A6NM62 1247 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 CCT5P48643 541 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 DRAP1Q14919 205 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 COBLL1Q53SF7 1204 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 TMCO5AQ8N6Q1 288 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 TTC23LQ6PF05 361 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 CPA4Q9UI42 421 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 PRG3Q9Y2Y8 225 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 CDK12Q9NYV4 1490 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 OCM2P0CE71 109 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 OCMP0CE72 109 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 CPA5Q8WXQ8 436 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 CSE1LP55060 971 aaKnown RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 GLE1Q53GS7 698 aaKnown RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 NUDT18Q6ZVK8 323 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 ZNF564Q8TBZ8 553 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 QRICH2Q9H0J4 1663 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 PGK2P07205 417 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 TEKT4Q8WW24 435 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 FAM49BQ9NUQ9 324 aa21.57■■□□□ 1.04
CDC42BPB-201ENST00000361246 TMEM247A6NEH6 219 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 WDR72Q3MJ13 1102 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 IER5Q5VY09 327 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 HEATR6Q6AI08 1181 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 GOLPH3LQ9H4A5 285 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 NPTXRO95502 500 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 YY1P25490 414 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 KATNAL1Q9BW62 490 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 XAB2Q9HCS7 855 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 FZD1Q9UP38 647 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 FTLP02792 175 aaPredicted RBP21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 DNAJB2P25686 324 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 MAP10Q9P2G4 905 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 SNX24Q9Y343 169 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 SPATA31A1Q5TZJ5 1347 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 ITPK1Q13572 414 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 GLRA4Q5JXX5 417 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 GSPT2Q8IYD1 628 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 PBKQ96KB5 322 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 DUOXA2Q1HG44 320 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 CYTH2Q99418 400 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 ZMYND12Q9H0C1 365 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 SMYD3Q9H7B4 428 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 CETPP11597 493 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 AKT1P31749 480 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 SEZ6Q53EL9 994 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 DCUN1D1Q96GG9 259 aa21.56■■□□□ 1.04
CDC42BPB-201ENST00000361246 NFU1Q9UMS0 254 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 CYP26A1O43174 497 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 RPSAP08865 295 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 WEE1P30291 646 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 PDIK1LQ8N165 341 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 EFHBQ8N7U6 833 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 CCDC138Q96M89 665 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 ARID5BQ14865 1188 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 SYTL3Q4VX76 610 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 PLEKHA5Q9HAU0 1116 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 STAP1Q9ULZ2 295 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 NDUFB10O96000 172 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 ABI2Q9NYB9 513 aaPredicted RBP21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 TPX2Q9ULW0 747 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 ABCC3O15438 1527 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 GPS1Q13098 491 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 UBA3Q8TBC4 463 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 FAM20AQ96MK3 541 aa21.55■■□□□ 1.04
CDC42BPB-201ENST00000361246 SPAG7O75391 227 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 CDH6P55285 790 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 GPC5P78333 572 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 PDCD7Q8N8D1 485 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 FMO2Q99518 471 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 HSPA6P17066 643 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 ETF1P62495 437 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 TMEM132DQ14C87 1099 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 SH3TC2Q8TF17 1288 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 VPS39Q96JC1 886 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 SOX11P35716 441 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 ATP11CQ8NB49 1132 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 KIAA1586Q9HCI6 787 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 SUN1O94901 812 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 ZRANB2O95218 330 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 HS6ST3Q8IZP7 471 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 A0A0G2JND7 137 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 IQANK1A0A1B0GTG1 560 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 DDIASQ8IXT1 998 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 SLC25A41Q8N5S1 370 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 TTC8Q8TAM2 541 aa21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-201ENST00000361246 IQSEC2Q5JU85 1478 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 TPI1P60174 286 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ZBED6P86452 979 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 HAUS6Q7Z4H7 955 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 IGFLR1Q9H665 355 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 PPP3CCP48454 512 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ROR1Q01973 937 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ORC1Q13415 861 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms