RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
COL18A1-203ENST00000359759 ZNF513Q8N8E2 541 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-203ENST00000359759 SH3GL3Q99963 347 aa16.99■□□□□ 0.31
COL18A1-203ENST00000359759 DHX35Q9H5Z1 703 aaKnown RBP16.99■□□□□ 0.31
COL18A1-203ENST00000359759 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
COL18A1-203ENST00000359759 MAD2L2Q9UI95 211 aa16.99■□□□□ 0.31
COL18A1-203ENST00000359759 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 CFAP73A6NFT4 308 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 SERPIND1P05546 499 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 IFNAR1P17181 557 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 ZNF341Q9BYN7 854 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 SIK2Q9H0K1 926 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 EML4Q9HC35 981 aaKnown RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 SYTL2Q9HCH5 934 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 CALB1P05937 261 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 TFDP2Q14188 446 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 IP6K2Q9UHH9 426 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 LDHAP00338 332 aaKnown RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 LRRC74AQ0VAA2 488 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 PKD2L2Q9NZM6 624 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 STAT3P40763 770 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 CEP78Q5JTW2 689 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 ASIC4Q96FT7 647 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 SPDYAQ5MJ70 313 aa16.98■□□□□ 0.31
COL18A1-203ENST00000359759 MARCOQ9UEW3 520 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-203ENST00000359759 CCDC22O60826 627 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 ENO3P13929 434 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 VAMP7P51809 220 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 BTKQ06187 659 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CCDC15Q0P6D6 951 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 MTMR1Q13613 665 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 RABGAP1LQ5R372 815 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 OXER1Q8TDS5 423 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 MAGEB5Q9BZ81 275 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SLC9A2Q9UBY0 812 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CAB39Q9Y376 341 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SPATA21Q7Z572 469 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CLEC4FQ8N1N0 589 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 TSC22D4Q9Y3Q8 395 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 NEDD4P46934 1319 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 ZBTB22O15209 634 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SPDYE7PQ495Y7 208 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CNKSR1Q969H4 720 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 DBR1Q9UK59 544 aaKnown RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CHRNA3P32297 505 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 TEX9Q8N6V9 391 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 AMACRQ9UHK6 382 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 V9GYQ6 96 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 H0YC42 278 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 TEX33O43247 280 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 UBTFL6P0CB48 400 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CYP2D6P10635 497 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 CLMNQ96JQ2 1002 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 SLC7A5P2Q9GIP4 190 aa16.97■□□□□ 0.31
COL18A1-203ENST00000359759 DEAF1O75398 565 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-203ENST00000359759 PRELPP51888 382 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 LONRF1Q17RB8 773 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-203ENST00000359759 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 CLCA2Q9UQC9 943 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 ZNF263O14978 683 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 ANGPT2O15123 496 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 HUS1O60921 280 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 PHF21AQ96BD5 680 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 POTEB3A0JP26 581 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 GRID2IPA4D2P6 1211 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 POTECB2RU33 542 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 KCNA3P22001 575 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 SDC4P31431 198 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 POTEBQ6S5H4 581 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 ATP11CQ8NB49 1132 aa16.96■□□□□ 0.31
COL18A1-203ENST00000359759 XPO1O14980 1071 aaKnown RBP16.96■□□□□ 0.3
COL18A1-203ENST00000359759 KRT75O95678 551 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 IMPDH2P12268 514 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 CHN1P15882 459 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 NFKBIAP25963 317 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 MLH1P40692 756 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 MAP3K10Q02779 954 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms