RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ESYT3A0FGR9 886 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 PTPN4P29074 926 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 IST1P53990 364 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 PTH1RQ03431 593 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 KHDC1Q4VXA5 237 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 NEK5Q6P3R8 708 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 IZUMO2Q6UXV1 221 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 EXD1Q8NHP7 514 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 NRG4Q8WWG1 115 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 XAB2Q9HCS7 855 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 A8MXQ7 604 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 MAPK13O15264 365 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ALOX15BO15296 676 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ICMTO60725 284 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
TDP1-201ENST00000335725 CLPTM1O96005 669 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 CD9P21926 228 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 ADCY8P40145 1251 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 RALGDSQ12967 914 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 HERC4Q5GLZ8 1057 aaPredicted RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 RPGRQ92834 1020 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 CIB1Q99828 191 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 IER2Q9BTL4 223 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 PRKAG3Q9UGI9 489 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 TRAF3IP3Q9Y228 551 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 CFL2Q9Y281 166 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 BTBD11A6QL63 1104 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 RGS16O15492 202 aaPredicted RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 TCEA1P23193 301 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 CRABP2P29373 138 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 IGHMBP2P38935 993 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 PIK3CAP42336 1068 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 CDK18Q07002 472 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 KCNJ8Q15842 424 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 RWDD4Q6NW29 188 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 DCDC5Q6ZRR9 648 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 GALNT7Q86SF2 657 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 NME9Q86XW9 330 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 TLE6Q9H808 572 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 MOV10Q9HCE1 1003 aaKnown RBP9.16□□□□□ -0.94
TDP1-201ENST00000335725 MOCS1Q9NZB8 636 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 DNAJB4Q9UDY4 337 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 FBXL5Q9UKA1 691 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 HPSEQ9Y251 543 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 SPEF1Q9Y4P9 236 aa9.16□□□□□ -0.94
TDP1-201ENST00000335725 TTC37Q6PGP7 1564 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 PVALEFA0A1B0GWK0 134 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 XPOTO43592 962 aaKnown RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 AP1G1O43747 822 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 CSPG5O95196 566 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
TDP1-201ENST00000335725 UAP1Q16222 522 aaPredicted RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 FAM47EQ6ZV65 393 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 HEATR4Q86WZ0 1026 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 NATD1Q8N6N6 113 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 ATP6V0D2Q8N8Y2 350 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 ZNF75CPQ92670 426 aaPredicted RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 MARCH7Q9H992 704 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 RRN3Q9NYV6 651 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 GMIPQ9P107 970 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 MAN1B1Q9UKM7 699 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 ACAD8Q9UKU7 415 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 APOBEC2Q9Y235 224 aaKnown RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8QA0A0J9YX86 632 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8OA6NCC3 632 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8NF8WBI6 632 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8RI6L899 631 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 OR6B1O95007 311 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 EPHB2P29323 1055 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 XIAPP98170 497 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 RNASELQ05823 741 aaKnown RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 GALNT1Q10472 559 aaPredicted RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 BTBD8Q5XKL5 378 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 MAP4K1Q92918 833 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 TMA16Q96EY4 203 aaKnown RBP9.15□□□□□ -0.94
TDP1-201ENST00000335725 LRRC37BQ96QE4 947 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 CHP1Q99653 195 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 NUP85Q9BW27 656 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 SH2D4AQ9H788 454 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 FGFR1OP2Q9NVK5 253 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 ZBTB21Q9ULJ3 1066 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
TDP1-201ENST00000335725 FADS2P1A8MWK0 482 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 TBX10O75333 385 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 PHKA2P46019 1235 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 IFNAR2P48551 515 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms