RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 BEGAINQ9BUH8 593 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 SLC4A1P02730 911 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 SPOPLQ6IQ16 392 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 ADGRA1Q86SQ6 560 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 BEST2Q8NFU1 509 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 TTC17Q96AE7 1141 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 OTUD5Q96G74 571 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 GMNCA6NCL1 334 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 PPP4CP60510 307 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 GPS1Q13098 491 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 NLRP14Q86W24 1093 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 TOPORSQ9NS56 1045 aaPredicted RBP17.42■□□□□ 0.38
BRD3-201ENST00000303407 CTIFO43310 598 aaKnown RBP17.42■□□□□ 0.38
BRD3-201ENST00000303407 AP3M2P53677 418 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 KRT17Q04695 432 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
BRD3-201ENST00000303407 RWDD4Q6NW29 188 aaKnown RBP17.42■□□□□ 0.38
BRD3-201ENST00000303407 RNF139Q8WU17 664 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 ARHGEF37A1IGU5 675 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 COPEO14579 308 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 KLHL38Q2WGJ6 581 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
BRD3-201ENST00000303407 FAM217BQ9NTX9 383 aaPredicted RBP17.42■□□□□ 0.38
BRD3-201ENST00000303407 KRT37O76014 449 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 KPNA2P52292 529 aaKnown RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 GALCP54803 685 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 STX1BP61266 288 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 NR1H3Q13133 447 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 HP1BP3Q5SSJ5 553 aaPredicted RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 RSBN1LQ6PCB5 846 aaPredicted RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 CEP120Q8N960 986 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 ESYT2A0FGR8 921 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 ZWINTO95229 277 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 TBC1D1Q86TI0 1168 aaPredicted RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 NCAPGQ9BPX3 1015 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 SLC9A1P19634 815 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 SMARCAL1Q9NZC9 954 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 EIF3DO15371 548 aaKnown RBP eCLIP17.41■□□□□ 0.38
BRD3-201ENST00000303407 CASP7P55210 303 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 NAB2Q15742 525 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 SKA2Q8WVK7 121 aaPredicted RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 MLXIPLQ9NP71 852 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 DCTN3O75935 186 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 KRT7P08729 469 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 NCF2P19878 526 aaPredicted RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 CIITAP33076 1130 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 LPAR1Q92633 364 aa17.41■□□□□ 0.38
BRD3-201ENST00000303407 CPSF3Q9UKF6 684 aaKnown RBP17.41■□□□□ 0.38
BRD3-201ENST00000303407 FGFR4P22455 802 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 RBBP5Q15291 538 aaKnown RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 FAM47EQ6ZV65 393 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 GRB10Q13322 594 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 BAATQ14032 418 aaPredicted RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 MICALL2Q8IY33 904 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 SLC30A5Q8TAD4 765 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 A0A0G2JND7 137 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 TYW5A2RUC4 315 aaKnown RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 MYO1CO00159 1063 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 HUS1O60921 280 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 ESRRAP11474 423 aaPredicted RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 SCP2P22307 547 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 GUCY2CP25092 1073 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 IZUMO3Q5VZ72 239 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 SPATA31A6Q5VVP1 1343 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 SDC4P31431 198 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 MAGEA9P43362 315 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 PDIA2Q13087 525 aaKnown RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 ZBED8Q8IZ13 594 aa17.4■□□□□ 0.38
BRD3-201ENST00000303407 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
BRD3-201ENST00000303407 TTI1O43156 1089 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 RPA1P27694 616 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 SLC1A1P43005 524 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 ROR1Q01973 937 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 SNRNP35Q16560 246 aaKnown RBP17.39■□□□□ 0.38
BRD3-201ENST00000303407 DUOXA2Q1HG44 320 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 FBXO41Q8TF61 875 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 TMEM143Q96AN5 459 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 RBM12Q9NTZ6 932 aaKnown RBP17.39■□□□□ 0.38
BRD3-201ENST00000303407 TFR2Q9UP52 801 aa17.39■□□□□ 0.38
BRD3-201ENST00000303407 NFX1Q12986 1120 aaKnown RBP17.39■□□□□ 0.37
BRD3-201ENST00000303407 NCAPHQ15003 741 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 CPA5Q8WXQ8 436 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 MXRA8Q9BRK3 442 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 SEC23AQ15436 765 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 TADA2BQ86TJ2 420 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 CRLF3Q8IUI8 442 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 NUDCD1Q96RS6 583 aa17.39■□□□□ 0.37
BRD3-201ENST00000303407 TRIM51Q9BSJ1 452 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms