RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 HSD3B7Q9H2F3 369 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 PABPC3Q9H361 631 aaKnown RBP17.71■□□□□ 0.43
SCAP-201ENST00000265565 STOML1Q9UBI4 398 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 PCSK1NQ9UHG2 260 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 SCINQ9Y6U3 715 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 HAUS5O94927 633 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 IGBP1P78318 339 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 CDO1Q16878 200 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 NUF2Q9BZD4 464 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 NOL3O60936 208 aaKnown RBP17.71■□□□□ 0.43
SCAP-201ENST00000265565 KITP10721 976 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 PSMA2P25787 234 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 ARL4CP56559 192 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 ERVK-9P63128 1117 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 CEP55Q53EZ4 464 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 NOD2Q9HC29 1040 aa17.71■□□□□ 0.43
SCAP-201ENST00000265565 REXO2Q9Y3B8 237 aaKnown RBP17.71■□□□□ 0.43
SCAP-201ENST00000265565 CDH16O75309 829 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ATP5HO75947 161 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 RPA1P27694 616 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 QARSP47897 775 aaKnown RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 CDR2Q01850 454 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 RINT1Q6NUQ1 792 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 FBXL13Q8NEE6 735 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ATL2Q8NHH9 583 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 EPS8L3Q8TE67 593 aaKnown RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 HSPH1Q92598 858 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ERP27Q96DN0 273 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 RBM15Q96T37 977 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAP-201ENST00000265565 MSTO1Q9BUK6 570 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 CARD9Q9H257 536 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 MED24O75448 989 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 P4HBP07237 508 aaKnown RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ANKMY2Q8IV38 441 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 C18orf8Q96DM3 657 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 TTC1Q99614 292 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 SMYD2Q9NRG4 433 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAP-201ENST00000265565 SLC16A3O15427 465 aaKnown RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 SCTRP47872 440 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 MAP3K21Q5TCX8 1036 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 GLIS3Q8NEA6 775 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 SCFD1Q8WVM8 642 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 CPA5Q8WXQ8 436 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 CDKL2Q92772 493 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 SCYL1Q96KG9 808 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 ENO4A6NNW6 628 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 NCF2P19878 526 aaPredicted RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 RHOT1Q8IXI2 618 aa17.7■□□□□ 0.42
SCAP-201ENST00000265565 CCDC97Q96F63 343 aaPredicted RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 RBM41Q96IZ5 413 aaKnown RBP17.7■□□□□ 0.42
SCAP-201ENST00000265565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAP-201ENST00000265565 IQANK1A0A1B0GTG1 560 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 COPEO14579 308 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 GGPS1O95749 300 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 SLC12A2P55011 1212 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 OR6B2Q6IFH4 312 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 FAM149B1Q96BN6 582 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 TRABDQ9H4I3 376 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
SCAP-201ENST00000265565 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 SRGAP2CP0DJJ0 459 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 ARSEP51690 589 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 ARFIP2P53365 341 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 AMPD2Q01433 879 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 TRIM42Q8IWZ5 723 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 RMDN3Q96TC7 470 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 TUBB6Q9BUF5 446 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 AKAP3O75969 853 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 NDUFB10O96000 172 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 APBA3O96018 575 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 ANXA13P27216 316 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 NR1H3Q13133 447 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 MAPK7Q13164 816 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 PPM1NQ8N819 430 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 DTX3LQ8TDB6 740 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 NSMCE1Q8WV22 266 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 BTBD6Q96KE9 485 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 ZNF341Q9BYN7 854 aa17.69■□□□□ 0.42
SCAP-201ENST00000265565 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 GRAMD1BQ3KR37 738 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 SYCP2LQ5T4T6 812 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 CCNYQ8ND76 341 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 VCPKMTQ9H867 229 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 CYTH3O43739 400 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 TRMT10CQ7L0Y3 403 aaKnown RBP17.68■□□□□ 0.42
SCAP-201ENST00000265565 C7orf31Q8N865 590 aa17.68■□□□□ 0.42
SCAP-201ENST00000265565 TMEM35BQ8NCS4 154 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms