RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GLUD2P49448 558 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 NLRP5P59047 1200 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 CDC42EP1Q00587 391 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 UBXN11Q5T124 520 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 BICD2Q8TD16 824 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 TBCKQ8TEA7 893 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 KIF2CQ99661 725 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 TMEM175Q9BSA9 504 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 MINDY3Q9H8M7 445 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 IFT122Q9HBG6 1241 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 ARHGEF3Q9NR81 526 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 CCDC196A0A1B0GTZ2 297 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 ITGA4P13612 1032 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 RPL17P18621 184 aaKnown RBP15.41■□□□□ 0.06
DDX39A-201ENST00000242776 DCLRE1AQ6PJP8 1040 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 ANO5Q75V66 913 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 CMASQ8NFW8 434 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-201ENST00000242776 ZNF707Q96C28 371 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-201ENST00000242776 PDRG1Q9NUG6 133 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 EPS15L1Q9UBC2 864 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 HES2Q9Y543 173 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
DDX39A-201ENST00000242776 GLULP15104 373 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 MLH1P40692 756 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 NEK4P51957 841 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 CCT2P78371 535 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 MRPL10Q7Z7H8 261 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 C1orf210Q8IVY1 113 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 CCDC148Q8NFR7 591 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 PRPF31Q8WWY3 499 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 RSPH1Q8WYR4 309 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 CPB2Q96IY4 423 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 ZFP42Q96MM3 310 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 GAD1Q99259 594 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 RPP25Q9BUL9 199 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 SLKQ9H2G2 1235 aaPredicted RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 SEMA4AQ9H3S1 761 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 NCOA5Q9HCD5 579 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 MIOSQ9NXC5 875 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 NUMBLQ9Y6R0 609 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 EML1O00423 815 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 GAS2O43903 313 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 KRT37O76014 449 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 SCNN1GP51170 649 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 USP11P51784 963 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 PUM1Q14671 1186 aaKnown RBP eCLIP15.4■□□□□ 0.061e-11■■□□□ 11.6
DDX39A-201ENST00000242776 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 RSPO4Q2I0M5 234 aaPredicted RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 KIAA0319Q5VV43 1072 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 ELMSAN1Q6PJG2 1045 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
DDX39A-201ENST00000242776 RUBCNQ92622 972 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 NT5C3AQ9H0P0 336 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
DDX39A-201ENST00000242776 OTOGLQ3ZCN5 2332 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 CEP250Q9BV73 2442 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 ARID2Q68CP9 1835 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 TGM5O43548 720 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 LAMP2P13473 410 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 PSMC5P62195 406 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 NTHL1P78549 312 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 LAMTOR4Q0VGL1 99 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 SNW1Q13573 536 aaKnown RBP15.39■□□□□ 0.05
DDX39A-201ENST00000242776 RDM1Q8NG50 284 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 CEP170P1Q96L14 293 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 CNTNAP3BQ96NU0 1288 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 CNTNAP3Q9BZ76 1288 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 DLGAP2Q9P1A6 1054 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 STK39Q9UEW8 545 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 SSX2IPQ9Y2D8 614 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 IPPQ9Y573 584 aa15.39■□□□□ 0.05
DDX39A-201ENST00000242776 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 ERLIN2O94905 339 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
DDX39A-201ENST00000242776 RCAN1P53805 252 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 GPC5P78333 572 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 HTR4Q13639 388 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 Q4G0T1 1027 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 SRGAP1Q7Z6B7 1085 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 GRASPQ7Z6J2 395 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-201ENST00000242776 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 RNF149Q8NC42 400 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 PJA1Q8NG27 643 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
DDX39A-201ENST00000242776 SLC7A3Q8WY07 619 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 GPR62Q9BZJ7 368 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 SPATA6Q9NWH7 488 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-201ENST00000242776 WRAP73Q9P2S5 460 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-201ENST00000242776 NCDNQ9UBB6 729 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 DPP7Q9UHL4 492 aa15.38■□□□□ 0.05
DDX39A-201ENST00000242776 NCOR2Q9Y618 2525 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 PATJQ8NI35 1801 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 CD72P21854 359 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms