RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CCDC113Q9H0I3 377 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 SIX2Q9NPC8 291 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 PMM2O15305 246 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 EXTL3O43909 919 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 IPO7O95373 1038 aaKnown RBP19.73■□□□□ 0.75
VIM-201ENST00000224237 SRGAP2CP0DJJ0 459 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 CLCN3P51790 818 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 ZPBP2Q6X784 338 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 REM2Q8IYK8 340 aaPredicted RBP19.73■□□□□ 0.75
VIM-201ENST00000224237 TMC2Q8TDI7 906 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 CCDC42Q96M95 316 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 SPAG5Q96R06 1193 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 ARHGAP20Q9P2F6 1191 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 LDHAP00338 332 aaKnown RBP19.72■□□□□ 0.75
VIM-201ENST00000224237 KLRC1P26715 233 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 KRT83P78385 493 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 CYP24A1Q07973 514 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 PPP3CAQ08209 521 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 RAPGEF1Q13905 1077 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 MAPK6Q16659 721 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 SLC9C1Q4G0N8 1177 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 C1orf220Q5T0J3 134 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 PLEKHO2Q8TD55 490 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 PARD3BQ8TEW8 1205 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 TARS2Q9BW92 718 aaKnown RBP19.72■□□□□ 0.75
VIM-201ENST00000224237 MRPL4Q9BYD3 311 aaKnown RBP19.72■□□□□ 0.75
VIM-201ENST00000224237 AIPL1Q9NZN9 384 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 AGO2Q9UKV8 859 aaKnown RBP19.72■□□□□ 0.75
VIM-201ENST00000224237 Q9Y3F1 56 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 FHOD1Q9Y613 1164 aa19.72■□□□□ 0.75
VIM-201ENST00000224237 SSU72P8A0A1W2PR75 194 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 ZNF233A6NK53 670 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 EIF3CLB5ME19 914 aaKnown RBP19.71■□□□□ 0.75
VIM-201ENST00000224237 MSCO60682 206 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 TMOD1P28289 359 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 MXI1P50539 228 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 PPFIA1Q13136 1202 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 LINC01465Q8N7H1 131 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 PRIMPOLQ96LW4 560 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 NLRP4Q96MN2 994 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
VIM-201ENST00000224237 FAM213AQ9BRX8 229 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 NFKBIZQ9BYH8 718 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 USP20Q9Y2K6 914 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 SERPING1P05155 500 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 RFX1P22670 979 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 GCLMP48507 274 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 ETF1P62495 437 aaKnown RBP19.71■□□□□ 0.75
VIM-201ENST00000224237 POU5F1BQ06416 359 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
VIM-201ENST00000224237 GRIK4Q16099 956 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 INTS2Q9H0H0 1204 aaKnown RBP19.71■□□□□ 0.75
VIM-201ENST00000224237 DEF6Q9H4E7 631 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 PAXBP1Q9Y5B6 917 aa19.71■□□□□ 0.75
VIM-201ENST00000224237 EVPLQ92817 2033 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 LRRIQ3A6PVS8 624 aaPredicted RBP19.7■□□□□ 0.74
VIM-201ENST00000224237 F2P00734 622 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 EDN1P05305 212 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 PRKCBP05771 671 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 GJB1P08034 283 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 GTF2H1P32780 548 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 MATR3P43243 847 aaKnown RBP eCLIP19.7■□□□□ 0.74
VIM-201ENST00000224237 FLT3LGP49771 235 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 CPT1AP50416 773 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 PRKCZQ05513 592 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 ARHGAP29Q52LW3 1261 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 HGSNATQ68CP4 663 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 MTHFD1LQ6UB35 978 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 EHBP1Q8NDI1 1231 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 KIF18AQ8NI77 898 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 PPP1R13LQ8WUF5 828 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 TRIB2Q92519 343 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 ZNF592Q92610 1267 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 CCDC127Q96BQ5 260 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 MSTO1Q9BUK6 570 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 TMEM117Q9H0C3 514 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 TMEM8AQ9HCN3 771 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 APEX2Q9UBZ4 518 aa19.7■□□□□ 0.74
VIM-201ENST00000224237 A0A0B4J269 797 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 TOM1L1O75674 476 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 TRPA1O75762 1119 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 PLEKP08567 350 aaPredicted RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 JAM2P57087 298 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 PTENP60484 403 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 ASIC2Q16515 512 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 EPC2Q52LR7 807 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 TDRD12Q587J7 1177 aaKnown RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 KRT39Q6A163 491 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 TRPV1Q8NER1 839 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 ZNF668Q96K58 619 aaPredicted RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 LZTFL1Q9NQ48 299 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 REXO2Q9Y3B8 237 aaKnown RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 HTTP42858 3142 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 RRN3P2A6NIE6 340 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 CLDN3O15551 220 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 AKR1A1P14550 325 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 EIF4A3P38919 411 aaKnown RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 KIF11P52732 1056 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 IQCEQ6IPM2 695 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms