RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PHLPP2Q6ZVD8 1323 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 CBWD2Q8IUF1 395 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 CCDC170Q8IYT3 715 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 SOCS4Q8WXH5 440 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 ZIC5Q96T25 663 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 TMEM134Q9H6X4 195 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 ZNF215Q9UL58 517 aaPredicted RBP23.37■■□□□ 1.33
SPAST-204ENST00000621856 N4BP1O75113 896 aaKnown RBP23.36■■□□□ 1.33
SPAST-204ENST00000621856 TUBB4AP04350 444 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 IGBP1P78318 339 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 DLG4P78352 724 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 LAMTOR4Q0VGL1 99 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 MKRN4PQ13434 485 aaPredicted RBP23.36■■□□□ 1.33
SPAST-204ENST00000621856 RAPGEF1Q13905 1077 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 CBWD6Q4V339 395 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 CBWD3Q5JTY5 395 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 CBWD5Q5RIA9 395 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 GPIHBP1Q8IV16 184 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 USP6NLQ92738 828 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 SUCLA2Q9P2R7 463 aaPredicted RBP23.36■■□□□ 1.33
SPAST-204ENST00000621856 IPO7O95373 1038 aaKnown RBP23.36■■□□□ 1.33
SPAST-204ENST00000621856 MMP3P08254 477 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 INSRRP14616 1297 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 UCHL3P15374 230 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 DPY19L2P1Q6NXN4 242 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 EFCAB12Q6NXP0 572 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 ZBTB8OSQ8IWT0 167 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 GPD1LQ8N335 351 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 METTL13Q8N6R0 699 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 SYN2Q92777 582 aaPredicted RBP23.36■■□□□ 1.33
SPAST-204ENST00000621856 CCDC42Q96M95 316 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 APBA2Q99767 749 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 SIX2Q9NPC8 291 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 FHOD1Q9Y613 1164 aa23.36■■□□□ 1.33
SPAST-204ENST00000621856 CA12O43570 354 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 PIGRP01833 764 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 SRGAP2CP0DJJ0 459 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 EFNA5P52803 228 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 CCL14Q16627 93 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 CYP4F22Q6NT55 531 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 SYT10Q6XYQ8 523 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 KIF18AQ8NI77 898 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 SPAG5Q96R06 1193 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 C16orf70Q9BSU1 422 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 INTS2Q9H0H0 1204 aaKnown RBP23.35■■□□□ 1.33
SPAST-204ENST00000621856 DEF6Q9H4E7 631 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 LZTFL1Q9NQ48 299 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 ARHGAP20Q9P2F6 1191 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 USP20Q9Y2K6 914 aa23.35■■□□□ 1.33
SPAST-204ENST00000621856 PLEKP08567 350 aaPredicted RBP23.34■■□□□ 1.33
SPAST-204ENST00000621856 CYP2C19P33261 490 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 MATR3P43243 847 aaKnown RBP eCLIP23.34■■□□□ 1.339e-6■■□□□ 13
SPAST-204ENST00000621856 ETF1P62495 437 aaKnown RBP23.34■■□□□ 1.33
SPAST-204ENST00000621856 CETN1Q12798 172 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 IRF5Q13568 498 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 TFDP1Q14186 410 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 ASIC2Q16515 512 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 DGKDQ16760 1214 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 TRIM65Q6PJ69 517 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 RHPN2Q8IUC4 686 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 RNF149Q8NC42 400 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 PAXBP1Q9Y5B6 917 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 MGAMO43451 1857 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 COL1A2P08123 1366 aa23.34■■□□□ 1.33
SPAST-204ENST00000621856 H3BRB1 525 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 DYNC1LI2O43237 492 aaPredicted RBP23.33■■□□□ 1.33
SPAST-204ENST00000621856 ADCY6O43306 1168 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 C22orf31O95567 290 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 EIF4A3P38919 411 aaKnown RBP23.33■■□□□ 1.33
SPAST-204ENST00000621856 CLCN3P51790 818 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 KRT83P78385 493 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 SLC9C1Q4G0N8 1177 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 ARHGAP29Q52LW3 1261 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 TDRD12Q587J7 1177 aaKnown RBP23.33■■□□□ 1.33
SPAST-204ENST00000621856 SLFN12LQ6IEE8 588 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 PLEKHO2Q8TD55 490 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 ZBTB10Q96DT7 871 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 FBXL18Q96ME1 805 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 FAM213AQ9BRX8 229 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 TARS2Q9BW92 718 aaKnown RBP23.33■■□□□ 1.33
SPAST-204ENST00000621856 C2orf40Q9H1Z8 148 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 TUT1Q9H6E5 874 aaKnown RBP23.33■■□□□ 1.33
SPAST-204ENST00000621856 GJD2Q9UKL4 321 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 EVPLQ92817 2033 aa23.33■■□□□ 1.33
SPAST-204ENST00000621856 EIF3CLB5ME19 914 aaKnown RBP23.33■■□□□ 1.32
SPAST-204ENST00000621856 KIAA0391O15091 583 aaKnown RBP23.33■■□□□ 1.32
SPAST-204ENST00000621856 GCLMP48507 274 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 PPP3CAQ08209 521 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 C1orf220Q5T0J3 134 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 USP37Q86T82 979 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 CCDC127Q96BQ5 260 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 EIF3CQ99613 913 aaKnown RBP23.33■■□□□ 1.32
SPAST-204ENST00000621856 KIAA1586Q9HCI6 787 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 FBXL5Q9UKA1 691 aa23.33■■□□□ 1.32
SPAST-204ENST00000621856 REXO2Q9Y3B8 237 aaKnown RBP23.33■■□□□ 1.32
SPAST-204ENST00000621856 A0A0U1RQJ8 604 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 ZNF233A6NK53 670 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms