RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 RPLP2P05387 115 aaKnown RBP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 SDHBP21912 280 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 NRG3P56975 720 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 NKX3-2P78367 333 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 DSC2Q02487 901 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 PPP3CAQ08209 521 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 MGAT2Q10469 447 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 IL10RAQ13651 578 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 THEMIS2Q5TEJ8 643 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 PPP4R3AQ6IN85 833 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 SWSAP1Q6NVH7 229 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 LIPIQ6XZB0 460 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 MAEAQ7L5Y9 396 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 WDR48Q8TAF3 677 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 KAT5Q92993 513 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 RGMAQ96B86 450 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 SELENOOQ9BVL4 669 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 RNF32Q9H0A6 362 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 BCAS3Q9H6U6 928 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 PRDM16Q9HAZ2 1276 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 RBM12Q9NTZ6 932 aaKnown RBP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
LINC00397-202ENST00000606785 CTNND2Q9UQB3 1225 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 NR2E3Q9Y5X4 410 aa6.31□□□□□ -1.4
LINC00397-202ENST00000606785 A0A088AWK7 358 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 CFAP69A5D8W1 941 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 FAM171A2A8MVW0 826 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 RASA4BC9J798 803 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 RASA4O43374 803 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 MAP2K6P52564 334 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 GPSM2P81274 684 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 POLD3Q15054 466 aaPredicted RBP6.3□□□□□ -1.4
LINC00397-202ENST00000606785 PLCL1Q15111 1095 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 RALBP1Q15311 655 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 STILQ15468 1287 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 SKIDA1Q1XH10 827 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 KANK2Q63ZY3 851 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 ZC3H14Q6PJT7 736 aaKnown RBP6.3□□□□□ -1.4
LINC00397-202ENST00000606785 CBLL1Q75N03 491 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 TTC7BQ86TV6 843 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
LINC00397-202ENST00000606785 SKAP1Q86WV1 359 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 MYRIPQ8NFW9 859 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 ABHD4Q8TB40 342 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 DEPTORQ8TB45 409 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
LINC00397-202ENST00000606785 ALG3Q92685 438 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 FDXACB1Q9BRP7 624 aaPredicted RBP6.3□□□□□ -1.4
LINC00397-202ENST00000606785 HERPUD2Q9BSE4 406 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 HAPLN2Q9GZV7 340 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
LINC00397-202ENST00000606785 F5H423 210 aaPredicted RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 BTKQ06187 659 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 FAM180AQ6UWF9 173 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 DPP9Q86TI2 863 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 DRC7Q8IY82 874 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 ANKRD42Q8N9B4 389 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 DTX3Q8N9I9 347 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 AGBL5Q8NDL9 886 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 OR5AN1Q8NGI8 311 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 OR2I1PQ8NGU4 316 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 PTPN18Q99952 460 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 C7orf25Q9BPX7 421 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 TRMT13Q9NUP7 481 aaKnown RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 GNL3LQ9NVN8 582 aaKnown RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
LINC00397-202ENST00000606785 PCDHB1Q9Y5F3 818 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 PCDHA13Q9Y5I0 950 aa6.29□□□□□ -1.4
LINC00397-202ENST00000606785 A0A0A6YYK5 440 aaPredicted RBP6.28□□□□□ -1.4
LINC00397-202ENST00000606785 TBX3O15119 743 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 FRS3O43559 492 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 SGTAO43765 313 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 TYRP1P17643 537 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 PIK3CBP42338 1070 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 HALP42357 657 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 PRIM2P49643 509 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 RAB1AP62820 205 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 IL13RA1P78552 427 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 MGAT5Q09328 741 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 DGKDQ16760 1214 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
LINC00397-202ENST00000606785 APOA5Q6Q788 366 aa6.28□□□□□ -1.4
LINC00397-202ENST00000606785 TMC5Q6UXY8 1006 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms