RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 KANSL1Q7Z3B3 1105 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 GPR155Q7Z3F1 870 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 BCL6BQ8N143 479 aaPredicted RBP4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 TEPSINQ96N21 525 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 FAM126AQ9BYI3 521 aaPredicted RBP4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 MS4A5Q9H3V2 200 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 KCMF1Q9P0J7 381 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 APOBEC2Q9Y235 224 aaKnown RBP4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 PTPN22Q9Y2R2 807 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 NOC2LQ9Y3T9 749 aaKnown RBP4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 FAM135BQ49AJ0 1406 aa4.97□□□□□ -1.61
CKS1BP3-201ENST00000600888 TMEM94Q12767 1356 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 LCHNA4D1U4 455 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 ELL2O00472 640 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 RAB11FIP3O75154 756 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 HMGCRP04035 888 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 BCAR1P56945 870 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 ANTXR2P58335 489 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 STAT4Q14765 748 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 UBXN11Q5T124 520 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 UNQ6494/PRO21346Q6UXR6 183 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 FRMD7Q6ZUT3 714 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 ESPNLQ6ZVH7 1005 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 LARP4Q71RC2 724 aaKnown RBP eCLIP4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 PLEKHH3Q7Z736 793 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 RALYLQ86SE5 291 aaKnown RBP4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 RASSF3Q86WH2 238 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 RPGRQ92834 1020 aaKnown RBP4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 RTEL1Q9NZ71 1219 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 SAE1Q9UBE0 346 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 MAGEL2Q9UJ55 1249 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 PRAG1Q86YV5 1406 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 ROBO1Q9Y6N7 1651 aa4.96□□□□□ -1.62
CKS1BP3-201ENST00000600888 BTBD11A6QL63 1104 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 ULK1O75385 1050 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 CANXP27824 592 aaKnown RBP4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 STAT5BP51692 787 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 RRADP55042 308 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 CTSWP56202 376 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 SESN3P58005 492 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 PPP2CBP62714 309 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 PPP2CAP67775 309 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 NFIXQ14938 502 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 SURF1Q15526 300 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 DGKDQ16760 1214 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 ZNF827Q17R98 1081 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 KIAA1841Q6NSI8 718 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 LHFPL2Q6ZUX7 228 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 RTKN2Q8IZC4 609 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 FAM177A1Q8N128 213 aaPredicted RBP4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 CLRN3Q8NCR9 226 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 ATL2Q8NHH9 583 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 WDR66Q8TBY9 1149 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 SLC4A7Q9Y6M7 1214 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 RPGRIP1LQ68CZ1 1315 aa4.95□□□□□ -1.62
CKS1BP3-201ENST00000600888 MSH6P52701 1360 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 A0A0A6YYJ9 748 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 MAFGO15525 162 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 GPR39O43194 453 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 KDM1AO60341 852 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 HSPA1LP34931 641 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 MEOX1P50221 254 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 TBC1D10BQ4KMP7 808 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 ZMAT1Q5H9K5 638 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 ARHGEF18Q6ZSZ5 1173 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 HDGFL2Q7Z4V5 671 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 BMP8AQ7Z5Y6 402 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 DDX42Q86XP3 938 aaKnown RBP eCLIP4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 OR5AN1Q8NGI8 311 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 MPHOSPH9Q99550 1183 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 PITHD1Q9GZP4 211 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 MTG2Q9H4K7 406 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 DENND2AQ9ULE3 1009 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 ATP8A1Q9Y2Q0 1164 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 DCCP43146 1447 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 SPATA31E1Q6ZUB1 1445 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 PTPRUQ92729 1446 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 KNDC1Q76NI1 1749 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 MYPNQ86TC9 1320 aa4.94□□□□□ -1.62
CKS1BP3-201ENST00000600888 PRSS38A1L453 326 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 CCDC144AA2RUR9 1427 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 LAMTOR5O43504 91 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 CNOT4O95628 575 aaKnown RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 PLATP00750 562 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 MRE11P49959 708 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 EPHB4P54760 987 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 TMPRSS15P98073 1019 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 AMPD3Q01432 767 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 PDCD1Q15116 288 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 MED1Q15648 1581 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 TBR1Q16650 682 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 ZBTB41Q5SVQ8 909 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms