RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 NLRP7Q8WX94 980 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 ARNTL2Q8WYA1 636 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 C17orf75Q9HAS0 396 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 GINS2Q9Y248 185 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 SQORQ9Y6N5 450 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 ADGRA3Q8IWK6 1321 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 KINO60870 393 aaKnown RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 TBCAO75347 108 aaKnown RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 PARNO95453 639 aaKnown RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 CXCL10P02778 98 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 GHRP10912 638 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 NPTX2P47972 431 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 PEX3P56589 373 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 PTENP60484 403 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 TAP1Q03518 808 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 TFDP1Q14186 410 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 PPP2R5AQ15172 486 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 CDCA2Q69YH5 1023 aaPredicted RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 KANK3Q6NY19 840 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 DEFB128Q7Z7B8 93 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 GPT2Q8TD30 523 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 SPIRE2Q8WWL2 714 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 IFT74Q96LB3 600 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 FIZ1Q96SL8 496 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 NFKBIZQ9BYH8 718 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 AGO3Q9H9G7 860 aaKnown RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 PARVGQ9HBI0 331 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 NOC2LQ9Y3T9 749 aaKnown RBP20.8■□□□□ 0.92
CCDC9-205ENST00000600117 TRIOO75962 3097 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
CCDC9-205ENST00000600117 FAM86C2PA6NEL3 165 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 LRRIQ4A6NIV6 560 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 PI4K2BG5E9Z4 385 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 KLRC4O43908 158 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 MYL1P05976 194 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 EIF4BP23588 611 aaKnown RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 RFC2P35250 354 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 ASIC1P78348 528 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 DPYDQ12882 1025 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 DMP1Q13316 513 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 ELOA2Q8IYF1 753 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 SCLT1Q96NL6 688 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 NTPCRQ9BSD7 190 aaKnown RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 KIFC3Q9BVG8 833 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 GCOM2Q9BZD3 368 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 MINDY3Q9H8M7 445 aa20.79■□□□□ 0.92
CCDC9-205ENST00000600117 LARSQ9P2J5 1176 aaKnown RBP20.79■□□□□ 0.92
CCDC9-205ENST00000600117 CSDE1O75534 798 aaKnown RBP20.78■□□□□ 0.92
CCDC9-205ENST00000600117 IDEP14735 1019 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 GAP43P17677 238 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 PHKA2P46019 1235 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 POSTNQ15063 836 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 ODR4Q5SWX8 454 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 TSHZ1Q6ZSZ6 1077 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 UNC13DQ70J99 1090 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 FAM228AQ86W67 206 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 SFR1Q86XK3 245 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 CCDC65Q8IXS2 484 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 MYCT1Q8N699 235 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 DEPTORQ8TB45 409 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 ZHX3Q9H4I2 956 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 ERVK-5Q9HDB9 667 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 PANK4Q9NVE7 773 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 ARHGAP28Q9P2N2 729 aa20.78■□□□□ 0.92
CCDC9-205ENST00000600117 ARHGEF15O94989 841 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 CD52P31358 61 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 NCKAP1LP55160 1127 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 MBTD1Q05BQ5 628 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 EHHADHQ08426 723 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 COASYQ13057 564 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 TCTN1Q2MV58 587 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 ALYREFQ86V81 257 aaKnown RBP20.77■□□□□ 0.92
CCDC9-205ENST00000600117 HERC6Q8IVU3 1022 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 KCNN1Q92952 543 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 CCDC113Q9H0I3 377 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 SEL1LQ9UBV2 794 aa20.77■□□□□ 0.92
CCDC9-205ENST00000600117 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.91
CCDC9-205ENST00000600117 PVALEFA0A1B0GWK0 134 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 SLC16A4O15374 487 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 TRAK2O60296 914 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 RPS6KA5O75582 802 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 FGFR4P22455 802 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 PNOCQ13519 176 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 PLEKHG4Q58EX7 1191 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 TMEM161BQ8NDZ6 487 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 CCDC34Q96HJ3 373 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 INO80BQ9C086 356 aaPredicted RBP20.76■□□□□ 0.91
CCDC9-205ENST00000600117 C2orf40Q9H1Z8 148 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 KMT5AQ9NQR1 393 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 OLFML3Q9NRN5 406 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 PADI3Q9ULW8 664 aa20.76■□□□□ 0.91
CCDC9-205ENST00000600117 LPXNO60711 386 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 NMT1P30419 496 aaKnown RBP20.75■□□□□ 0.91
CCDC9-205ENST00000600117 AMHR2Q16671 573 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 HERC4Q5GLZ8 1057 aaPredicted RBP20.75■□□□□ 0.91
CCDC9-205ENST00000600117 TAS1R3Q7RTX0 852 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 ZBTB8OSQ8IWT0 167 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms