RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 LONRF3Q496Y0 759 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 SPOUT1Q5T280 376 aaKnown RBP20.6■□□□□ 0.89
SNRPA-205ENST00000598923 ARL6IP4Q66PJ3 421 aaKnown RBP20.6■□□□□ 0.89
SNRPA-205ENST00000598923 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 MCPH1Q8NEM0 835 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 CASD1Q96PB1 797 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 MMTAG2Q9BU76 263 aaKnown RBP20.6■□□□□ 0.89
SNRPA-205ENST00000598923 TMEM117Q9H0C3 514 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 CLEC1BQ9P126 229 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 PCDHGC5Q9Y5F6 944 aa20.6■□□□□ 0.89
SNRPA-205ENST00000598923 A0A0U1RQF3 1178 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 FAM86C2PA6NEL3 165 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 EYA4O95677 639 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 CYP11B2P19099 503 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 NRIP1P48552 1158 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 PTENP60484 403 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 CSPP1Q1MSJ5 1256 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
SNRPA-205ENST00000598923 LRRC55Q6ZSA7 311 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
SNRPA-205ENST00000598923 CD207Q9UJ71 328 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 CLIC4Q9Y696 253 aa20.59■□□□□ 0.89
SNRPA-205ENST00000598923 LRRIQ4A6NIV6 560 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 HOXA2O43364 376 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 ERLIN2O94905 339 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 GLP2RO95838 553 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 BMP15O95972 392 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 ALADP13716 330 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 LAG3P18627 525 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 NDUFV1P49821 464 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 ABI1Q8IZP0 508 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 CDK5RAP3Q96JB5 506 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 TLR9Q9NR96 1032 aa20.58■□□□□ 0.89
SNRPA-205ENST00000598923 ARID2Q68CP9 1835 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 FSCN2O14926 492 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 SSBP05455 408 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNRPA-205ENST00000598923 ERVFC1P60507 584 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 NCBP1Q09161 790 aaKnown RBP20.57■□□□□ 0.88
SNRPA-205ENST00000598923 COASYQ13057 564 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 RBM23Q86U06 439 aaKnown RBP20.57■□□□□ 0.88
SNRPA-205ENST00000598923 ZNF598Q86UK7 904 aaKnown RBP20.57■□□□□ 0.88
SNRPA-205ENST00000598923 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 LPPQ93052 612 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 PNMA5Q96PV4 448 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 AGPAT5Q9NUQ2 364 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 LZTS1Q9Y250 596 aa20.57■□□□□ 0.88
SNRPA-205ENST00000598923 ARIH1Q9Y4X5 557 aaPredicted RBP20.57■□□□□ 0.88
SNRPA-205ENST00000598923 EOMESO95936 686 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 ATF7P17544 494 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-205ENST00000598923 MARCKSP29966 332 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-205ENST00000598923 HOXA11P31270 313 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-205ENST00000598923 UBA7P41226 1012 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 PLCB3Q01970 1234 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 GRIN1Q05586 938 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 MBTD1Q05BQ5 628 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 POU5F1BQ06416 359 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 PDE12Q6L8Q7 609 aaKnown RBP20.56■□□□□ 0.88
SNRPA-205ENST00000598923 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 CABP7Q86V35 215 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 SMRP1Q8NCR6 262 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 HELQQ8TDG4 1101 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 CPB2Q96IY4 423 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 ZSCAN16Q9H4T2 348 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-205ENST00000598923 TLE6Q9H808 572 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 FAM105AQ9NUU6 356 aa20.56■□□□□ 0.88
SNRPA-205ENST00000598923 PRR33A8MZF0 331 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 DCXO43602 365 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 SKIP12755 728 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 LIG1P18858 919 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 PLA2G5P39877 138 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 KCNT2Q6UVM3 1135 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 LRRC43Q8N309 656 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 RASSF8Q8NHQ8 419 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 MICAL1Q8TDZ2 1067 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 BSNDQ8WZ55 320 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 MRPS27Q92552 414 aaKnown RBP20.55■□□□□ 0.88
SNRPA-205ENST00000598923 POP1Q99575 1024 aaKnown RBP20.55■□□□□ 0.88
SNRPA-205ENST00000598923 TRAIPQ9BWF2 469 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 PCDHB2Q9Y5E7 798 aa20.55■□□□□ 0.88
SNRPA-205ENST00000598923 PER2O15055 1255 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 TSPAN1O60635 241 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 DUSP6Q16828 381 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 IFNLR1Q8IU57 520 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-205ENST00000598923 ZBTB8OSQ8IWT0 167 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 VN1R2Q8NFZ6 395 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 DEPTORQ8TB45 409 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 CALML4Q96GE6 196 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 IFT74Q96LB3 600 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 AK8Q96MA6 479 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 CDCA3Q99618 268 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-205ENST00000598923 NT5C3AQ9H0P0 336 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 BARX2Q9UMQ3 279 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-205ENST00000598923 HCN4Q9Y3Q4 1203 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 TRIOO75962 3097 aa20.54■□□□□ 0.88
SNRPA-205ENST00000598923 B4GALT5O43286 388 aa20.53■□□□□ 0.88
SNRPA-205ENST00000598923 LONP1P36776 959 aaKnown RBP20.53■□□□□ 0.88
SNRPA-205ENST00000598923 RAB27AP51159 221 aa20.53■□□□□ 0.88
SNRPA-205ENST00000598923 RAD51AP2Q09MP3 1159 aa20.53■□□□□ 0.88
SNRPA-205ENST00000598923 KCNC3Q14003 757 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms