RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ODF2LQ9ULJ1 636 aa19.07■□□□□ 0.64
SHKBP1-212ENST00000596163 PTPRSQ13332 1948 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 LOXHD1Q8IVV2 1947 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 LAMA2P24043 3122 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 H0YCG3 227 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 ACKR2O00590 384 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 PRKCBP05771 671 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 PLS3P13797 630 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 ARF4P18085 180 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 POU3F3P20264 500 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 CTNNB1P35222 781 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 NPTX2P47972 431 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 ME1P48163 572 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 GATMP50440 423 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 KRT85P78386 507 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 NUCB2P80303 420 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 DNM1Q05193 864 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 GPM6BQ13491 265 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 PRPF4BQ13523 1007 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 MCM6Q14566 821 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 GLB1LQ6UWU2 654 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 SV2BQ7L1I2 683 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 APBB1IPQ7Z5R6 666 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 MRPL10Q7Z7H8 261 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 DAW1Q8N136 415 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 SPIRE2Q8WWL2 714 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 CPB2Q96IY4 423 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 NTPCRQ9BSD7 190 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 C11orf84Q9BUA3 381 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 TMEM134Q9H6X4 195 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 RCOR1Q9UKL0 485 aa19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 MRPL42Q9Y6G3 142 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-212ENST00000596163 CNTNAP2Q9UHC6 1331 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 A0A1B0GUA9 196 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 CARNS1A5YM72 827 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 SFI1A8K8P3 1242 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 C5orf67F2Z3F1 127 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 H3BNC9 293 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 RFXAPO00287 272 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 N4BP3O15049 544 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 LIG1P18858 919 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 SCP2P22307 547 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 STAT6P42226 847 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 RAD51AP2Q09MP3 1159 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 ADGRE1Q14246 886 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 PTPROQ16827 1216 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 CSPP1Q1MSJ5 1256 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 ARSHQ5FYA8 562 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 UBXN11Q5T124 520 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 SLC27A1Q6PCB7 646 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 LRRC43Q8N309 656 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 MAFAQ8NHW3 353 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 CASD1Q96PB1 797 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 ADPGKQ9BRR6 497 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 ZDHHC9Q9Y397 364 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 PCDHB12Q9Y5F1 795 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 GBF1Q92538 1859 aa19.05■□□□□ 0.64
SHKBP1-212ENST00000596163 EPOPA6NHQ4 379 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 FAM13AO94988 1023 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 ITGA4P13612 1032 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 ATF7P17544 494 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 NCLP19338 710 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 MAPK7Q13164 816 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 SPRED2Q7Z698 418 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 URGCPQ8TCY9 931 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 HELQQ8TDG4 1101 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 P2RX5Q93086 422 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 LRRC27Q9C0I9 530 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 CCDC113Q9H0I3 377 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 RNF19AQ9NV58 838 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 TYW1Q9NV66 732 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 FAM13BQ9NYF5 915 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 KANSL3Q9P2N6 904 aa19.04■□□□□ 0.64
SHKBP1-212ENST00000596163 B4GALT5O43286 388 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 TBCAO75347 108 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 LAG3P18627 525 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 ABCD1P33897 745 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 STRN3Q13033 797 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 CLLU1OSQ5K130 101 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 GDPD5Q8WTR4 605 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 LPPQ93052 612 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 REEP2Q9BRK0 252 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 PYM1Q9BRP8 204 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 KIFC3Q9BVG8 833 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 LMAN2LQ9H0V9 348 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 RSAD1Q9HA92 442 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 PARVGQ9HBI0 331 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 ARHGAP28Q9P2N2 729 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 PCDHA7Q9UN72 937 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 IPPQ9Y573 584 aa19.03■□□□□ 0.64
SHKBP1-212ENST00000596163 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 NPTXRO95502 500 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 GIT2Q14161 759 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 NOMO2Q5JPE7 1267 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 IQUBQ8NA54 791 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 SLC17A8Q8NDX2 589 aa19.02■□□□□ 0.64
SHKBP1-212ENST00000596163 LRRC15Q8TF66 581 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms