RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 COQ4Q9Y3A0 265 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 STYXL1Q9Y6J8 313 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 SCN4AP35499 1836 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 EXTL3O43909 919 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 GGPS1O95749 300 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 H2AFXP16104 143 aaPredicted RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 MXI1P50539 228 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 EFNA5P52803 228 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 PTK2Q05397 1052 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 TTLL4Q14679 1199 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 DRAP1Q14919 205 aaPredicted RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 BRD3Q15059 726 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 CELF3Q5SZQ8 465 aaKnown RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 ANKRD23Q86SG2 305 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
VPS25-203ENST00000589520 EMSYQ7Z589 1322 aa11.28□□□□□ -0.6
VPS25-203ENST00000589520 A0A087X0T9 212 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 F8VZ95 297 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 K7ERI5 159 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 NOP56O00567 594 aaKnown RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 HNRNPDLO14979 420 aaKnown RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 ASAP2O43150 1006 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ERLIN1O75477 346 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ABL1P00519 1130 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 H2AFZP0C0S5 128 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 FAM228BP0C875 321 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ATP4AP20648 1035 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ADSSP30520 456 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 LIG4P49917 911 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 AP3M2P53677 418 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 MFAP3P55082 362 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 NAP1L1P55209 391 aaKnown RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 SP4Q02446 784 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 KIF22Q14807 665 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 KIAA0753Q2KHM9 967 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 Q3C1V9 767 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 CBWD6Q4V339 395 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 EPC2Q52LR7 807 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ALKBH5Q6P6C2 394 aaKnown RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 H2AFVQ71UI9 128 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 SYCE1Q8N0S2 351 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 LMO3Q8TAP4 145 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 POMGNT1Q8WZA1 660 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 RUBCNQ92622 972 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 BICD1Q96G01 975 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 C2orf40Q9H1Z8 148 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 SMARCAD1Q9H4L7 1026 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 TRIM10Q9UDY6 481 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 NAGPAQ9UK23 515 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 SNX12Q9UMY4 172 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.61
VPS25-203ENST00000589520 HYOU1Q9Y4L1 999 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
VPS25-203ENST00000589520 TMEM150BA6NC51 233 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 CES2O00748 559 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 EVI5O60447 810 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ATP1A1P05023 1023 aaKnown RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 TCF7P36402 384 aaPredicted RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 GPC3P51654 580 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 CLDN10P78369 228 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ARID5AQ03989 594 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 IRF5Q13568 498 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 SURF1Q15526 300 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ZPBP2Q6X784 338 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ZNF572Q7Z3I7 529 aaPredicted RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms