RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 CLDND1Q9NY35 253 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 DNM3Q9UQ16 869 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 STK24Q9Y6E0 443 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 TTLL13PA6NNM8 815 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 K7ELQ4 463 aaPredicted RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 LINC01565O15544 149 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 B4GALT3O60512 393 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 AXLP30530 894 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 LTBRP36941 435 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 BCAR1P56945 870 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 DLX2Q07687 328 aaPredicted RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 NCBP1Q09161 790 aaKnown RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 COL19A1Q14993 1142 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 PCBP1Q15365 356 aaKnown RBP eCLIP21.09■□□□□ 0.97
TPM4-204ENST00000586499 CSPP1Q1MSJ5 1256 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 NOTUMQ6P988 496 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 BRAPQ7Z569 592 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 RBM23Q86U06 439 aaKnown RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 PNMA5Q96PV4 448 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 UHRF1Q96T88 793 aaPredicted RBP21.09■□□□□ 0.97
TPM4-204ENST00000586499 PLIN2Q99541 437 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 CSRNP2Q9H175 543 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 SPG21Q9NZD8 308 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 USP20Q9Y2K6 914 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 HES2Q9Y543 173 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 IPPQ9Y573 584 aa21.09■□□□□ 0.97
TPM4-204ENST00000586499 ZC3H11AO75152 810 aaKnown RBP eCLIP21.08■□□□□ 0.97
TPM4-204ENST00000586499 EYA4O95677 639 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
TPM4-204ENST00000586499 SYT1P21579 422 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 PLCB3Q01970 1234 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 UBE3AQ05086 875 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 CTC1Q2NKJ3 1217 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 LEXMQ3ZCV2 418 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 ZNF280BQ86YH2 543 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 SLC39A11Q8N1S5 342 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 MRPS27Q92552 414 aaKnown RBP21.08■□□□□ 0.97
TPM4-204ENST00000586499 TTC28Q96AY4 2481 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 GBP3Q9H0R5 595 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 NRDE2Q9H7Z3 1164 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 RSAD1Q9HA92 442 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 TLR9Q9NR96 1032 aa21.08■□□□□ 0.97
TPM4-204ENST00000586499 MUC3AQ02505 3323 aa21.08■□□□□ 0.96
TPM4-204ENST00000586499 ITGA4P13612 1032 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 PDCP20941 246 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 NRIP1P48552 1158 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 ALDH7A1P49419 539 aaKnown RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 SF3A1Q15459 793 aaKnown RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 ARL6IP4Q66PJ3 421 aaKnown RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 CDCA2Q69YH5 1023 aaPredicted RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 FAM173BQ6P4H8 233 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 TMEM173Q86WV6 379 aaPredicted RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 INTS4Q96HW7 963 aaKnown RBP21.07■□□□□ 0.96
TPM4-204ENST00000586499 KIFC3Q9BVG8 833 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 RUSC1Q9BVN2 902 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 APOL6Q9BWW8 343 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 FZD8Q9H461 694 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 DNAJB4Q9UDY4 337 aa21.07■□□□□ 0.96
TPM4-204ENST00000586499 A0A1B0GUA9 196 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 PER2O15055 1255 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 DDHD2O94830 711 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 POMCP01189 267 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 EDN1P05305 212 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 LIG1P18858 919 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 GRIN1Q05586 938 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 RNASELQ05823 741 aaKnown RBP21.06■□□□□ 0.96
TPM4-204ENST00000586499 ZBTB8OSQ8IWT0 167 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 CCDC51Q96ER9 411 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 NXF3Q9H4D5 531 aaKnown RBP21.06■□□□□ 0.96
TPM4-204ENST00000586499 LZTS1Q9Y250 596 aa21.06■□□□□ 0.96
TPM4-204ENST00000586499 FSCN2O14926 492 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 NPTXRO95502 500 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 GALTP07902 379 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 IL9P15248 144 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 PPM1AP35813 382 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 NAMPTP43490 491 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
TPM4-204ENST00000586499 KRT17Q04695 432 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 RESTQ13127 1097 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 ADAM15Q13444 863 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 CLUL1Q15846 466 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 HYIQ5T013 277 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 PLPP4Q5VZY2 271 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 RINT1Q6NUQ1 792 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 SLC27A1Q6PCB7 646 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 PPP4R3CPQ6ZMV5 832 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 DAW1Q8N136 415 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 CNNM3Q8NE01 707 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 DEPTORQ8TB45 409 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 URGCPQ8TCY9 931 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 BCL7CQ8WUZ0 217 aaPredicted RBP21.05■□□□□ 0.96
TPM4-204ENST00000586499 KIFAP3Q92845 792 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 GAD1Q99259 594 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 TCF25Q9BQ70 676 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 TRIM6Q9C030 488 aaPredicted RBP21.05■□□□□ 0.96
TPM4-204ENST00000586499 C2orf40Q9H1Z8 148 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 TLE6Q9H808 572 aa21.05■□□□□ 0.96
TPM4-204ENST00000586499 PRMT7Q9NVM4 692 aaPredicted RBP21.05■□□□□ 0.96
TPM4-204ENST00000586499 MIOSQ9NXC5 875 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms