RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 MICAL1Q8TDZ2 1067 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 CDCA3Q99618 268 aaPredicted RBP13.51□□□□□ -0.25
PSMD3-205ENST00000580980 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 MTMR6Q9Y217 621 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
PSMD3-205ENST00000580980 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 SPTBN5Q9NRC6 3674 aaKnown RBP13.5□□□□□ -0.25
PSMD3-205ENST00000580980 H3BQ06 376 aaPredicted RBP13.5□□□□□ -0.25
PSMD3-205ENST00000580980 BRD1O95696 1058 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 ERVFC1P60507 584 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 NUCB2P80303 420 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 EP400NLQ6ZTU2 488 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 KCTD17Q8N5Z5 321 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 URGCPQ8TCY9 931 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 LPPQ93052 612 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 CSRNP2Q9H175 543 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 C2orf40Q9H1Z8 148 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 IGFLR1Q9H665 355 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 TLE6Q9H808 572 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
PSMD3-205ENST00000580980 TBC1D13Q9NVG8 400 aa13.5□□□□□ -0.25
PSMD3-205ENST00000580980 NRIP1P48552 1158 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 BCAR1P56945 870 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 ATP2C1P98194 919 aaPredicted RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 AMHR2Q16671 573 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 ARL6IP4Q66PJ3 421 aaKnown RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 CDCA2Q69YH5 1023 aaPredicted RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 HACE1Q8IYU2 909 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 SMG8Q8ND04 991 aaKnown RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 RSAD1Q9HA92 442 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 GPRC5CQ9NQ84 441 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 PRMT7Q9NVM4 692 aaPredicted RBP13.49□□□□□ -0.25
PSMD3-205ENST00000580980 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 KIAA1024Q9UPX6 916 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 DNM3Q9UQ16 869 aa13.49□□□□□ -0.25
PSMD3-205ENST00000580980 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 MEIS3P2A8K0S8 358 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 INPPL1O15357 1258 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 CSPG5O95196 566 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ZSCAN22P10073 491 aaPredicted RBP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ITGA4P13612 1032 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ARF4P18085 180 aaPredicted RBP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 GTF2F1P35269 517 aaKnown RBP eCLIP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 NAMPTP43490 491 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 RNASELQ05823 741 aaKnown RBP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 PPP2R5AQ15172 486 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 IL17AQ16552 155 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ECM1Q16610 540 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 FAM187BQ17R55 369 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 LONRF3Q496Y0 759 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 TCF25Q9BQ70 676 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 TMEM175Q9BSA9 504 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 FZD8Q9H461 694 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ENTPD7Q9NQZ7 604 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
PSMD3-205ENST00000580980 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 PRKAG3Q9UGI9 489 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 IPPQ9Y573 584 aa13.48□□□□□ -0.25
PSMD3-205ENST00000580980 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
PSMD3-205ENST00000580980 LINC01565O15544 149 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
PSMD3-205ENST00000580980 TBX10O75333 385 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 EYA4O95677 639 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 GALTP07902 379 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 SRGAP2BP0DMP2 458 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 IL9P15248 144 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 PBX3P40426 434 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 NDUFV1P49821 464 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 DLX2Q07687 328 aaPredicted RBP13.47□□□□□ -0.25
PSMD3-205ENST00000580980 COASYQ13057 564 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
PSMD3-205ENST00000580980 PKP1Q13835 747 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 GIT2Q14161 759 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
PSMD3-205ENST00000580980 DUSP6Q16828 381 aa13.47□□□□□ -0.25
PSMD3-205ENST00000580980 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms