RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 RCSD1Q6JBY9 416 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 PPM1NQ8N819 430 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 FAM167BQ9BTA0 163 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 TRPV6Q9H1D0 765 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 DCTN4Q9UJW0 460 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 PCDHA6Q9UN73 950 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 PCDHA8Q9Y5H6 950 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 KLHL2O95198 593 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 KRT16P08779 473 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 IL10P22301 178 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 SDC4P31431 198 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 GPS1Q13098 491 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 EFTUD2Q15029 972 aaKnown RBP eCLIP11.4□□□□□ -0.595e-13■■■■■ 55.4
SEC22B-201ENST00000578049 CCDC92Q53HC0 331 aaPredicted RBP11.4□□□□□ -0.59
SEC22B-201ENST00000578049 TMCO5AQ8N6Q1 288 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 NEDD1Q8NHV4 660 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 AGPAT1Q99943 283 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 CARD9Q9H257 536 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 EPC1Q9H2F5 836 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 CCDC134Q9H6E4 229 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 STAP1Q9ULZ2 295 aa11.4□□□□□ -0.59
SEC22B-201ENST00000578049 SYCE1LA8MT33 242 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 P4HA2O15460 535 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 APOA1P02647 267 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 SLC16A2P36021 539 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 SNRPFP62306 86 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 CDK17Q00537 523 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 GRAPQ13588 217 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 RASSF3Q86WH2 238 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 ENGASEQ8NFI3 743 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 TCP11X1B4DZS4 312 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PIK3R2O00459 728 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 DEAF1O75398 565 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PEX3P56589 373 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 CYFIP1Q7L576 1253 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 GLYCTKQ8IVS8 523 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 ZBED8Q8IZ13 594 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 DNAJC17Q9NVM6 304 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 UBE4BO95155 1302 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PRR36Q9H6K5 1346 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 ARHGEF9O43307 516 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 EYA4O95677 639 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PMLP29590 882 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 GCLMP48507 274 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 LRRC8BQ6P9F7 803 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 RAD9BQ6WBX8 426 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PRUNE1Q86TP1 453 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 SUCLA2Q9P2R7 463 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 BLOC1S6Q9UL45 172 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 UTYO14607 1347 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 TMEM253P0C7T8 217 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 CHN1P15882 459 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 BCAR1P56945 870 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 C4orf22Q6V702 233 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 FUT8Q9BYC5 575 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PSMC3IPQ9P2W1 217 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 ASAP1Q9ULH1 1129 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 SCP2P22307 547 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KCNA4P22459 653 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 HSPA13P48723 471 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KRT17Q04695 432 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KSR1Q8IVT5 923 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 FAM193BQ96PV7 902 aaPredicted RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 C2orf40Q9H1Z8 148 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 CTTNQ14247 550 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KYAT1Q16773 422 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 ANKRD40Q6AI12 368 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PSPC1Q8WXF1 523 aaKnown RBP11.39□□□□□ -0.59
SEC22B-201ENST00000578049 PHF20Q9BVI0 1012 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KIF9Q9HAQ2 790 aa11.39□□□□□ -0.59
SEC22B-201ENST00000578049 KLHL8Q9P2G9 620 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms