RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MINDY3Q9H8M7 445 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 NGRNQ9NPE2 291 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 ANKEF1Q9NU02 776 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 PCDHB2Q9Y5E7 798 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 CARNS1A5YM72 827 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 MEIS3P2A8K0S8 358 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 HIDE1A8MVS5 230 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 FSCN2O14926 492 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 LYPLA2O95372 231 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 MCM4P33991 863 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TECP42680 631 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 RARRES1P49788 294 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 RBM10P98175 930 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 ZNF174Q15697 407 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 MAEAQ7L5Y9 396 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 CPB2Q96IY4 423 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 MSLNLQ96KJ4 702 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 MTMR9Q96QG7 549 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 HSD17B14Q9BPX1 270 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 POLR3FQ9H1D9 316 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 RSAD1Q9HA92 442 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 XPNPEP1Q9NQW7 623 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 CLEC1BQ9P126 229 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 RAPGEFL1Q9UHV5 662 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 TRIP11Q15643 1979 aa10.73□□□□□ -0.69
NPLOC4-216ENST00000574344 A0A087WWV3 80 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 LRRIQ4A6NIV6 560 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 PI4K2BG5E9Z4 385 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ZNF623O75123 536 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ITGA4P13612 1032 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ALADP13716 330 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 AXLP30530 894 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 PTENP60484 403 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 COASYQ13057 564 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 CAPSQ13938 189 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 HAUS3Q68CZ6 603 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 NOSTRINQ8IVI9 506 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 VPS52Q8N1B4 723 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 FBXO18Q8NFZ0 1043 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ASAP3Q8TDY4 903 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 LRFN3Q9BTN0 628 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 APOL6Q9BWW8 343 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 APOL5Q9BWW9 433 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 TUFT1Q9NNX1 390 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 HCN4Q9Y3Q4 1203 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 KIF3AQ9Y496 699 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 USP15Q9Y4E8 981 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 CNTNAP2Q9UHC6 1331 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 C2orf16Q68DN1 1984 aa10.72□□□□□ -0.69
NPLOC4-216ENST00000574344 TRIOO75962 3097 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 ARHGEF35A5YM69 484 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 DCXO43602 365 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 TSPAN1O60635 241 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 MED24O75448 989 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 OFD1O75665 1012 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 EYA4O95677 639 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 POMCP01189 267 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 GSE1Q14687 1217 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 SKOR2Q2VWA4 1001 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 MCTP1Q6DN14 999 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 CATSPER3Q86XQ3 398 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 ZBTB8OSQ8IWT0 167 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 HACE1Q8IYU2 909 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 VN1R2Q8NFZ6 395 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 CASP10Q92851 521 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 CCDC51Q96ER9 411 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 IGSF21Q96ID5 467 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 NACC1Q96RE7 527 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 EIF2AQ9BY44 585 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 IPPQ9Y573 584 aa10.71□□□□□ -0.69
NPLOC4-216ENST00000574344 CITO14578 2027 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 GPR37L1O60883 481 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 NPTXRO95502 500 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 CXCL14O95715 111 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 GALTP07902 379 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms