RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NFKBIZQ9BYH8 718 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 DNAJB4Q9UDY4 337 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
FANCA-220ENST00000566409 NOL7Q9UMY1 257 aaKnown RBP16.28■□□□□ 0.2
FANCA-220ENST00000566409 INPP5FQ9Y2H2 1132 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 INO80B-WBP1J3KQ70 363 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 B4GALT5O43286 388 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 DDHD2O94830 711 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 ARF4P18085 180 aaPredicted RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 GJB2P29033 226 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 PPM1AP35813 382 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 NDUFV1P49821 464 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 TFDP1Q14186 410 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 GJD3Q8N144 294 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 ERMNQ8TAM6 284 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 BSNDQ8WZ55 320 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 POLD4Q9HCU8 107 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 LRWD1Q9UFC0 647 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 PUF60Q9UHX1 559 aaKnown RBP16.27■□□□□ 0.2
FANCA-220ENST00000566409 CD207Q9UJ71 328 aa16.27■□□□□ 0.2
FANCA-220ENST00000566409 TDRD15B5MCY1 1934 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 ZC3H11AO75152 810 aaKnown RBP eCLIP16.26■□□□□ 0.19
FANCA-220ENST00000566409 ERLIN2O94905 339 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 EYA4O95677 639 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 GALTP07902 379 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 AXLP30530 894 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 ALDH7A1P49419 539 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 KRT17Q04695 432 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 ZP2Q05996 745 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 COASYQ13057 564 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 SMAD4Q13485 552 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 PDIA5Q14554 519 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 PCBP1Q15365 356 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■■■□□ 17.6
FANCA-220ENST00000566409 PADI6Q6TGC4 694 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 CDR2LQ86X02 465 aaPredicted RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 PGBD4Q96DM1 585 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 VN1R3Q9BXE9 311 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 RSAD1Q9HA92 442 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 NGRNQ9NPE2 291 aaKnown RBP16.26■□□□□ 0.19
FANCA-220ENST00000566409 HES2Q9Y543 173 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 IPPQ9Y573 584 aa16.26■□□□□ 0.19
FANCA-220ENST00000566409 C19orf67A6NJJ6 358 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 PP2D1A8MPX8 630 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CYP11B2P19099 503 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CDC25AP30304 524 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CCT6AP40227 531 aaKnown RBP16.25■□□□□ 0.19
FANCA-220ENST00000566409 SLC11A1P49279 550 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CDCA2Q69YH5 1023 aaPredicted RBP16.25■□□□□ 0.19
FANCA-220ENST00000566409 MCTP1Q6DN14 999 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 NOTUMQ6P988 496 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
FANCA-220ENST00000566409 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 RSPH1Q8WYR4 309 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 IGSF21Q96ID5 467 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 GBP3Q9H0R5 595 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 MIOSQ9NXC5 875 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 KIAA1024Q9UPX6 916 aa16.25■□□□□ 0.19
FANCA-220ENST00000566409 CNTNAP2Q9UHC6 1331 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 A0A1B0GUA9 196 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 LRRIQ4A6NIV6 560 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 POMCP01189 267 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 EDN1P05305 212 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 MUTP22033 750 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 TMEM184AQ6ZMB5 413 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 ADHFE1Q8IWW8 467 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 CCDC51Q96ER9 411 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 CDCA3Q99618 268 aaPredicted RBP16.24■□□□□ 0.19
FANCA-220ENST00000566409 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
FANCA-220ENST00000566409 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 FZD8Q9H461 694 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 PRKAG3Q9UGI9 489 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
FANCA-220ENST00000566409 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 PI4K2BG5E9Z4 385 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 INPPL1O15357 1258 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 ITGA4P13612 1032 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 SSTR3P32745 418 aaPredicted RBP16.23■□□□□ 0.19
FANCA-220ENST00000566409 PRPHP41219 470 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 MCM2P49736 904 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 RNASELQ05823 741 aaKnown RBP16.23■□□□□ 0.19
FANCA-220ENST00000566409 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 CNNM3Q8NE01 707 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms