RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 MAPK6Q16659 721 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 UBXN11Q5T124 520 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 ECHDC2Q86YB7 292 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 C7orf25Q9BPX7 421 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 LRRC27Q9C0I9 530 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 ELAC1Q9H777 363 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 TRAK2O60296 914 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF623O75123 536 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 EOMESO95936 686 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 PRKCBP05771 671 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 MAPTP10636 758 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 LIG1P18858 919 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 SYKP43405 635 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 PRPF4BQ13523 1007 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 RAB30Q15771 203 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF598Q86UK7 904 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 KCNN1Q92952 543 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 MYH11P35749 1972 aa13.16□□□□□ -0.3
RABGGTA-218ENST00000560777 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF202O95125 648 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CA3P07451 260 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 SKIP12755 728 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 IDEP14735 1019 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CASP1P29466 404 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 NMT1P30419 496 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 AFMP43652 599 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF720Q7Z2F6 126 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 CCDC51Q96ER9 411 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 YME1L1Q96TA2 773 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 BLZF1Q9H2G9 400 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 RNF19AQ9NV58 838 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 PANK4Q9NVE7 773 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
RABGGTA-218ENST00000560777 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 GBF1Q92538 1859 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 H0YCG3 227 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 FGFR1P11362 822 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 GAP43P17677 238 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 GATMP50440 423 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 RAB27AP51159 221 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 GTF2BQ00403 316 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 CUL4BQ13620 913 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 CSPP1Q1MSJ5 1256 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 FMR1NBQ8N0W7 255 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms