RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GLP2RO95838 553 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 ALDH2P05091 517 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 GALTP07902 379 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 ITGA4P13612 1032 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 NCLP19338 710 aaKnown RBP10.4□□□□□ -0.74
YBX3-218ENST00000546298 MUTP22033 750 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 CA8P35219 290 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 ARL2P36404 184 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 TECP42680 631 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 RABEP1Q15276 862 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 TPRNQ4KMQ1 711 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 HAUS3Q68CZ6 603 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 ANKRD54Q6NXT1 300 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 NOSTRINQ8IVI9 506 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 VPS52Q8N1B4 723 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 MCPH1Q8NEM0 835 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 PIGOQ8TEQ8 1089 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
YBX3-218ENST00000546298 IGSF21Q96ID5 467 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 TMEM175Q9BSA9 504 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 PHF7Q9BWX1 381 aaPredicted RBP10.4□□□□□ -0.74
YBX3-218ENST00000546298 NFKBIZQ9BYH8 718 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 NRDE2Q9H7Z3 1164 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
YBX3-218ENST00000546298 DBR1Q9UK59 544 aaKnown RBP10.4□□□□□ -0.74
YBX3-218ENST00000546298 HCN4Q9Y3Q4 1203 aa10.4□□□□□ -0.74
YBX3-218ENST00000546298 ARIH1Q9Y4X5 557 aaPredicted RBP10.4□□□□□ -0.74
YBX3-218ENST00000546298 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
YBX3-218ENST00000546298 HIDE1A8MVS5 230 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 WNT7AO00755 349 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 ST18O60284 1047 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 TSPAN1O60635 241 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 USO1O60763 962 aaKnown RBP10.39□□□□□ -0.75
YBX3-218ENST00000546298 NR1I2O75469 434 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 RPA1P27694 616 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 CAPSQ13938 189 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 C8orf34Q49A92 452 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 CES5AQ6NT32 575 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 AGMOQ6ZNB7 445 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 CATSPER3Q86XQ3 398 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 RAB34Q9BZG1 259 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 TRIM6Q9C030 488 aaPredicted RBP10.39□□□□□ -0.75
YBX3-218ENST00000546298 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 CSRNP2Q9H175 543 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 POLR3FQ9H1D9 316 aaPredicted RBP10.39□□□□□ -0.75
YBX3-218ENST00000546298 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
YBX3-218ENST00000546298 FAN1Q9Y2M0 1017 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 IRAK3Q9Y616 596 aa10.39□□□□□ -0.75
YBX3-218ENST00000546298 RALGAPA2Q2PPJ7 1873 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 A0A0C4DFX4 3053 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 TCF20Q9UGU0 1960 aaKnown RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 ARHGEF35A5YM69 484 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 LRRIQ4A6NIV6 560 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 MEIS3P2A8K0S8 358 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 LOC730098B7Z3J9 87 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 CLASP2O75122 1294 aaKnown RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 CTSAP10619 480 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 CYP11B2P19099 503 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 GLRA2P23416 452 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 SLC11A1P49279 550 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 MBTD1Q05BQ5 628 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 ITIH3Q06033 890 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 KCNC3Q14003 757 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 CBX2Q14781 532 aaPredicted RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 HERC4Q5GLZ8 1057 aaPredicted RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 LLGL2Q6P1M3 1020 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 PPFIBP1Q86W92 1011 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 ZNF280BQ86YH2 543 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 VN1R2Q8NFZ6 395 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 SUSD6Q92537 303 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 PRIMPOLQ96LW4 560 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 NECTIN4Q96NY8 510 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 KIF2CQ99661 725 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 EMILIN2Q9BXX0 1053 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 C2orf40Q9H1Z8 148 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 S1PR5Q9H228 398 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 PRMT7Q9NVM4 692 aaPredicted RBP10.38□□□□□ -0.75
YBX3-218ENST00000546298 DZANK1Q9NVP4 752 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 SSX2IPQ9Y2D8 614 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 GIT1Q9Y2X7 761 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 IPPQ9Y573 584 aa10.38□□□□□ -0.75
YBX3-218ENST00000546298 MYH9P35579 1960 aaKnown RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 CHD7Q9P2D1 2997 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 A0A087WWV3 80 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 A0A1B0GUA9 196 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 FAM86C2PA6NEL3 165 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 LAD1O00515 517 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms