RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 DDIT3P35638 169 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 PPP2R5EQ16537 467 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 TATDN1Q6P1N9 297 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 CXCL17Q6UXB2 119 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
SMAD5-211ENST00000545279 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
SMAD5-211ENST00000545279 SLC9A7Q96T83 725 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 SENP7Q9BQF6 1050 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 MAGEB5Q9BZ81 275 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 JMJD4Q9H9V9 463 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 CHST12Q9NRB3 414 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 SERTAD1Q9UHV2 236 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 PCDHB5Q9Y5E4 795 aa7.03□□□□□ -1.28
SMAD5-211ENST00000545279 MYO1FO00160 1098 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CALB1P05937 261 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CKBP12277 381 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CPA1P15085 419 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 KLRC1P26715 233 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 MRPS6P82932 125 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 RABGAP1LQ5R372 815 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 OTOP3Q7RTS5 596 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CROCCP2Q86T23 111 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PRIMPOLQ96LW4 560 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TSPAN18Q96SJ8 248 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TSSK1BQ9BXA7 367 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 FAM217BQ9NTX9 383 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PLA2G4CQ9UP65 541 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 ABHD14A-ACY1A0A1B0GW23 586 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 A0A1W2PQD8 194 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CFAP99D6REC4 459 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 RHOBTB3O94955 611 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PGK1P00558 417 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PDHBP11177 359 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 RNASE9P60153 205 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 ERICH1Q86X53 443 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 REPS2Q8NFH8 660 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CFAP57Q96MR6 1250 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 LSG1Q9H089 658 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 AGAP1Q9UPQ3 857 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PPP6R2O75170 966 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CD58P19256 250 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TFDP2Q14188 446 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 HERC6Q8IVU3 1022 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 MB21D2Q8IYB1 491 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CNPY4Q8N129 248 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 SPON2Q9BUD6 331 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 SRRTQ9BXP5 876 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CYP4F11Q9HBI6 524 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PLEKHA8P1O95397 391 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TUBB4BP68371 445 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TSTA3Q13630 321 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 KRT39Q6A163 491 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 BBOF1Q8ND07 529 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 RSAD2Q8WXG1 361 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 USP13Q92995 863 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 MED15Q96RN5 788 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 LSM14BQ9BX40 385 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 OLFML3Q9NRN5 406 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 UTP6Q9NYH9 597 aaKnown RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 MCF2P10911 925 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 CASQ1P31415 396 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 LHX1P48742 406 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 LMNB2Q03252 620 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 TMED2Q15363 201 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 USP41Q3LFD5 358 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 LRRC8DQ7L1W4 858 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 RBAKQ9NYW8 714 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-211ENST00000545279 INSL6Q9Y581 213 aa7.02□□□□□ -1.29
SMAD5-211ENST00000545279 SF3B1O75533 1304 aaKnown RBP eCLIP7.02□□□□□ -1.293e-6■■■■■ 70.2
SMAD5-211ENST00000545279 KLRK1P26718 216 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 PTK7Q13308 1070 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 ZNF235Q14590 738 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 SLC39A14Q15043 492 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 GLYCTKQ8IVS8 523 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 SCG3Q8WXD2 468 aaKnown RBP7.01□□□□□ -1.29
SMAD5-211ENST00000545279 TMEM117Q9H0C3 514 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 ASAH2Q9NR71 780 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 SETD4Q9NVD3 440 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 ASNSD1Q9NWL6 643 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 NCDNQ9UBB6 729 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 SNX9Q9Y5X1 595 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 PTCH2Q9Y6C5 1203 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 CEP152O94986 1710 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 C2CD2LO14523 706 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 LGR5O75473 907 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 LGALS2P05162 132 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 IVLP07476 585 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 H2AFZP0C0S5 128 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 MTHFRP42898 656 aa7.01□□□□□ -1.29
SMAD5-211ENST00000545279 LAMB3Q13751 1172 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms