RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 YME1L1Q96TA2 773 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 PANK2Q9BZ23 570 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 CUEDC2Q9H467 287 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 FAM105AQ9NUU6 356 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 KBTBD4Q9NVX7 518 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 RBM19Q9Y4C8 960 aaKnown RBP21.11■□□□□ 0.97
DDX55-211ENST00000544429 PCDHB7Q9Y5E2 793 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 MYMKA6NI61 221 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 TTLL13PA6NNM8 815 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 ACKR2O00590 384 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 NCLP19338 710 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 RAB27AP51159 221 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 DHX8Q14562 1220 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 MAPK6Q16659 721 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 TWF2Q6IBS0 349 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 NOTUMQ6P988 496 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 SV2BQ7L1I2 683 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 SPRED2Q7Z698 418 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 MRPL10Q7Z7H8 261 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 CMTR2Q8IYT2 770 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 PDILTQ8N807 584 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 CLP1Q92989 425 aaKnown RBP21.1■□□□□ 0.97
DDX55-211ENST00000544429 GUCD1Q96NT3 240 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 TMEM134Q9H6X4 195 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 KCNG1Q9UIX4 513 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 HPSEQ9Y251 543 aa21.1■□□□□ 0.97
DDX55-211ENST00000544429 PHLPP2Q6ZVD8 1323 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 SKIP12755 728 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 NCKAP1LP55160 1127 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 ERVK-21P61565 698 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
DDX55-211ENST00000544429 TMEM161BQ8NDZ6 487 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 DDX12PQ92771 950 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 CPB2Q96IY4 423 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 KMT5AQ9NQR1 393 aa21.09■□□□□ 0.97
DDX55-211ENST00000544429 LARSQ9P2J5 1176 aaKnown RBP21.09■□□□□ 0.97
DDX55-211ENST00000544429 FRMD3A2A2Y4 597 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 CCDC169A6NNP5 214 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 PRKCBP05771 671 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 FGFR1P11362 822 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 GATMP50440 423 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 GRIN2CQ14957 1233 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 CLLU1OSQ5K130 101 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 CNNM4Q6P4Q7 775 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 IQUBQ8NA54 791 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 TNMDQ9H2S6 317 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 PARVGQ9HBI0 331 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 KCNH3Q9ULD8 1083 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 LRFN2Q9ULH4 789 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 PCDHB2Q9Y5E7 798 aa21.08■□□□□ 0.97
DDX55-211ENST00000544429 COL4A4P53420 1690 aaPredicted RBP21.08■□□□□ 0.96
DDX55-211ENST00000544429 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 K7ERI5 159 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 SLC16A4O15374 487 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 POLR2DO15514 142 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 MAPTP10636 758 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 NCBP1Q09161 790 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 PRPF4BQ13523 1007 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 NT5DC1Q5TFE4 455 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 SMG8Q8ND04 991 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 RSPH1Q8WYR4 309 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 CASD1Q96PB1 797 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 EIF2AQ9BY44 585 aaKnown RBP21.07■□□□□ 0.96
DDX55-211ENST00000544429 GDPD2Q9HCC8 539 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 FAM13BQ9NYF5 915 aa21.07■□□□□ 0.96
DDX55-211ENST00000544429 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 HOXA2O43364 376 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 SCP2P22307 547 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 SLC27A1Q6PCB7 646 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 DHX58Q96C10 678 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 FAM161BQ96MY7 647 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 TGS1Q96RS0 853 aaKnown RBP21.06■□□□□ 0.96
DDX55-211ENST00000544429 PYM1Q9BRP8 204 aaKnown RBP21.06■□□□□ 0.96
DDX55-211ENST00000544429 TMEM117Q9H0C3 514 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 ST6GALNAC4Q9H4F1 302 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 PDZD7Q9H5P4 517 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 MAGEF1Q9HAY2 307 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
DDX55-211ENST00000544429 EYSQ5T1H1 3165 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 COL6A3P12111 3177 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 EPOPA6NHQ4 379 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 C5orf67F2Z3F1 127 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 INPPL1O15357 1258 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 FAM13AO94988 1023 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 PFKFB1P16118 471 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 SMTNP53814 917 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 BTG3Q14201 252 aaPredicted RBP21.05■□□□□ 0.96
DDX55-211ENST00000544429 AGMOQ6ZNB7 445 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 DYMQ7RTS9 669 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 FIBCD1Q8N539 461 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 CNNM3Q8NE01 707 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 SAMD11Q96NU1 681 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 CDX2Q99626 313 aaPredicted RBP21.05■□□□□ 0.96
DDX55-211ENST00000544429 C17orf80Q9BSJ5 609 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 PTPRHQ9HD43 1115 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 CHMP5Q9NZZ3 219 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 SEL1LQ9UBV2 794 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 USP20Q9Y2K6 914 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms