RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 AXLP30530 894 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 HOXA11P31270 313 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 RAB27AP51159 221 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 TFF2Q03403 129 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 IL17AQ16552 155 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ECM1Q16610 540 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 TCEAL5Q5H9L2 206 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 MRPL10Q7Z7H8 261 aaKnown RBP10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 COLGALT1Q8NBJ5 622 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 HELQQ8TDG4 1101 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ASAP3Q8TDY4 903 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 POLR3FQ9H1D9 316 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 AGPAT5Q9NUQ2 364 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 FAM105AQ9NUU6 356 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 DNM3Q9UQ16 869 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PCDHB2Q9Y5E7 798 aa10.8□□□□□ -0.68
TNFRSF1A-214ENST00000543048 BDP1A6H8Y1 2624 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 INO80B-WBP1J3KQ70 363 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 USO1O60763 962 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ERLIN2O94905 339 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ATF7P17544 494 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 DNAJB1P25685 340 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 UBE3AQ05086 875 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CAPSQ13938 189 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CAMK1Q14012 370 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ARL6IP4Q66PJ3 421 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 KCNT2Q6UVM3 1135 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 THNSL1Q8IYQ7 743 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CNNM3Q8NE01 707 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 POF1BQ8WVV4 589 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 RSPH1Q8WYR4 309 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 UBE2ZQ9H832 354 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 DDX19AQ9NUU7 478 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PUF60Q9UHX1 559 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
TNFRSF1A-214ENST00000543048 OFD1O75665 1012 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 FGF18O76093 207 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 EYA4O95677 639 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CDC25AP30304 524 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 KRT17Q04695 432 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 MBTD1Q05BQ5 628 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PDE12Q6L8Q7 609 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 GLB1LQ6UWU2 654 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 BRAPQ7Z569 592 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 LRRC43Q8N309 656 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 SNX29Q8TEQ0 813 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 LPPQ93052 612 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PPP2R3CQ969Q6 453 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PABPC5Q96DU9 382 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CCDC51Q96ER9 411 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 ZNF558Q96NG5 402 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 MRPL9Q9BYD2 267 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 BHMT2Q9H2M3 363 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 UBN1Q9NPG3 1134 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 SPG21Q9NZD8 308 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 RBM19Q9Y4C8 960 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 VCANP13611 3396 aa10.78□□□□□ -0.68
TNFRSF1A-214ENST00000543048 CARNS1A5YM72 827 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PP2D1A8MPX8 630 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 E9PMD0 336 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TSPAN1O60635 241 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 BMP15O95972 392 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ALDH7A1P49419 539 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCNQ1P51787 676 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PPP2R5AQ15172 486 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 AMHR2Q16671 573 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NOTUMQ6P988 496 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZBTB8OSQ8IWT0 167 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CPB2Q96IY4 423 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 IFT74Q96LB3 600 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MMTAG2Q9BU76 263 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 C2orf40Q9H1Z8 148 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FZD8Q9H461 694 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 IGFLR1Q9H665 355 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PRMT7Q9NVM4 692 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KANSL3Q9P2N6 904 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms