RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 GTF2BQ00403 316 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 CUL4BQ13620 913 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 GPNMBQ14956 572 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 TSHZ1Q6ZSZ6 1077 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 ZNF720Q7Z2F6 126 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 GPT2Q8TD30 523 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 STAMQ92783 540 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 APBB2Q92870 758 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 HVCN1Q96D96 273 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 FZD8Q9H461 694 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 CLSTN2Q9H4D0 955 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 PRDM5Q9NQX1 630 aaPredicted RBP13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 CHST12Q9NRB3 414 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
CYB561A3-214ENST00000540139 ALPK3Q96L96 1907 aa13.02□□□□□ -0.32
CYB561A3-214ENST00000540139 CARNS1A5YM72 827 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 CCDC169A6NNP5 214 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 K7ERI5 159 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 NBNO60934 754 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 ITGB8P26012 769 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 RAD51AP2Q09MP3 1159 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 COASYQ13057 564 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 LPIN1Q14693 890 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 MAPK6Q16659 721 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 OSMRQ99650 979 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 STRA6Q9BX79 667 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
CYB561A3-214ENST00000540139 ACKR2O00590 384 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 SPTLC1O15269 473 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 EIF3DO15371 548 aaKnown RBP eCLIP13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 EFCAB14O75071 495 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 CTSHP09668 335 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 MBTD1Q05BQ5 628 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 TMEM40Q8WWA1 233 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 SEPT8Q92599 483 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 CCDC51Q96ER9 411 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 ERVK-5Q9HDB9 667 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 NOC2LQ9Y3T9 749 aaKnown RBP13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
CYB561A3-214ENST00000540139 MYH11P35749 1972 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 UBE4BO95155 1302 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 ADGRA3Q8IWK6 1321 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 SLC16A4O15374 487 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 KIF20AO95235 890 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 PIGRP01833 764 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 GHRP10912 638 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 CCL23P55773 120 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 SNRPFP62306 86 aaKnown RBP13□□□□□ -0.33
CYB561A3-214ENST00000540139 FPGSQ05932 587 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 STRN3Q13033 797 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 PAK2Q13177 524 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 PNOCQ13519 176 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 COBLL1Q53SF7 1204 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 ZPBP2Q6X784 338 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
CYB561A3-214ENST00000540139 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
CYB561A3-214ENST00000540139 FAM228AQ86W67 206 aa13□□□□□ -0.33
CYB561A3-214ENST00000540139 IFIH1Q9BYX4 1025 aaKnown RBP13□□□□□ -0.33
CYB561A3-214ENST00000540139 AGO3Q9H9G7 860 aaKnown RBP13□□□□□ -0.33
CYB561A3-214ENST00000540139 POLD4Q9HCU8 107 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms