RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PCDHB2Q9Y5E7 798 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 C19orf81C9J6K1 198 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 UBL4AP11441 157 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 ELNP15502 786 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 CALML3P27482 149 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 SHMT1P34896 483 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 SYKP43405 635 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 TNNI2P48788 182 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 TUBA4AP68366 448 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 BRD3Q15059 726 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 EXOC3L1Q86VI1 746 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 ZFPM1Q8IX07 1006 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 SMC6Q96SB8 1091 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 IDI2Q9BXS1 227 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 EHD4Q9H223 541 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 MEFVO15553 781 aaPredicted RBP13.57□□□□□ -0.24
DDX55-206ENST00000539934 VIMP08670 466 aaKnown RBP13.57□□□□□ -0.24
DDX55-206ENST00000539934 S100A1P23297 94 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 PSMA3P25788 255 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 CCT5P48643 541 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 NOVP48745 357 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 TUBA3CQ13748 450 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 NPY5RQ15761 445 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 EARS2Q5JPH6 523 aaKnown RBP13.57□□□□□ -0.24
DDX55-206ENST00000539934 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 LLGL2Q6P1M3 1020 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 USP17L2Q6R6M4 530 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 SHC4Q6S5L8 630 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 TEX9Q8N6V9 391 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 RPGRIP1Q96KN7 1286 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 UQCC2Q9BRT2 126 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 SH3GLB2Q9NR46 395 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
DDX55-206ENST00000539934 STXBP3O00186 592 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 BIN1O00499 593 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SNX2O60749 519 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 FARP2O94887 1054 aaPredicted RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 GJB1P08034 283 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 TAF11Q15544 211 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 RESP18Q5W5W9 173 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SLC2A7Q6PXP3 512 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 CRELD2Q6UXH1 353 aaPredicted RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SESTD1Q86VW0 696 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 VPS52Q8N1B4 723 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 HTATIP2Q9BUP3 242 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SPZ1Q9BXG8 430 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SLC40A1Q9NP59 571 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 M0QX08 132 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 KCNJ13O60928 360 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 TTLL1O95922 423 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 CD9P21926 228 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 MSLNQ13421 630 aaPredicted RBP13.56□□□□□ -0.24
DDX55-206ENST00000539934 STX1AQ16623 288 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
DDX55-206ENST00000539934 GREB1LQ9C091 1923 aaPredicted RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 USP17L5A8MUK1 530 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 PTPREP23469 700 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 ZNF165P49910 485 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 CYP4A11Q02928 519 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 MAPRE1Q15691 268 aaKnown RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 LONRF2Q1L5Z9 754 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 PIK3AP1Q6ZUJ8 805 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 HDXQ7Z353 690 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 BLIDQ8IZY5 108 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 SPERTQ8NA61 448 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 MRRFQ96E11 262 aaKnown RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 SUCLA2Q9P2R7 463 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms