RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 URGCPQ8TCY9 931 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 BSNDQ8WZ55 320 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 PARVGQ9HBI0 331 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 UBN1Q9NPG3 1134 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 PCDHB12Q9Y5F1 795 aa13.81□□□□□ -0.2
CYB561A3-213ENST00000539890 ACKR2O00590 384 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 N4BP3O15049 544 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 SLC16A4O15374 487 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 FGFR1P11362 822 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 ITGA4P13612 1032 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 ABCD1P33897 745 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 CTNNB1P35222 781 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 MATR3P43243 847 aaKnown RBP eCLIP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 ERVK-21P61565 698 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 SLC27A1Q6PCB7 646 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 DYMQ7RTS9 669 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 TMEM192Q8IY95 271 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 CEP57L1Q8IYX8 460 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 LEO1Q8WVC0 666 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 MYLIPQ8WY64 445 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 RSPH1Q8WYR4 309 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 DHX58Q96C10 678 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 REEP2Q9BRK0 252 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 APOL6Q9BWW8 343 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 FZD8Q9H461 694 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 CUEDC2Q9H467 287 aa13.8□□□□□ -0.2
CYB561A3-213ENST00000539890 POLR2DO15514 142 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 ZNF623O75123 536 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 NPTXRO95502 500 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 IDEP14735 1019 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 SCP2P22307 547 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 PTPROQ16827 1216 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 ARSHQ5FYA8 562 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 SLC17A8Q8NDX2 589 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 SPIRE2Q8WWL2 714 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 ZNF689Q96CS4 500 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 BICD1Q96G01 975 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 C17orf80Q9BSJ5 609 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 TMEM134Q9H6X4 195 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 KANSL3Q9P2N6 904 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 PARP2Q9UGN5 583 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 INPP5FQ9Y2H2 1132 aa13.79□□□□□ -0.2
CYB561A3-213ENST00000539890 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 B4GALT5O43286 388 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 TRAK2O60296 914 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 RB1P06400 928 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 BMPR1AP36894 532 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 GATMP50440 423 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 GPM6BQ13491 265 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 GIT2Q14161 759 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 CSPP1Q1MSJ5 1256 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 LRRC43Q8N309 656 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 DDX12PQ92771 950 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 LPPQ93052 612 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 NTPCRQ9BSD7 190 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 C11orf84Q9BUA3 381 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 IPPQ9Y573 584 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
CYB561A3-213ENST00000539890 K7ENM7 598 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 RFXAPO00287 272 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 NR1I2O75469 434 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 GAP43P17677 238 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 LAG3P18627 525 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 CMA1P23946 247 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 AMHR2Q16671 573 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 HERC4Q5GLZ8 1057 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-213ENST00000539890 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms