RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MPP3Q13368 585 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 GNL2Q13823 731 aaKnown RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 DDB1Q16531 1140 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 MAN2A1Q16706 1144 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 DDR2Q16832 855 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 BEAN1Q3B7T3 259 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 KRT71Q3SY84 523 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 TM4SF20Q53R12 229 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 CATSPEREQ5SY80 951 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 CC2D1AQ6P1N0 951 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 BMP8AQ7Z5Y6 402 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 RTN4RL1Q86UN2 441 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 CISD2Q8N5K1 135 aaKnown RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 C2orf69Q8N8R5 385 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 OR5M3Q8NGP4 307 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 RPGRQ92834 1020 aaKnown RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 DYDC2Q96IM9 177 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 MAML3Q96JK9 1138 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 UIMC1Q96RL1 719 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 DUSP26Q9BV47 211 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 SPATA9Q9BWV2 254 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 POLR3BQ9NW08 1133 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 RNF181Q9P0P0 153 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 DNAI1Q9UI46 699 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 ZNF580Q9UK33 172 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 SETD1BQ9UPS6 1966 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 TRBV23-1A0A0A0MS06 115 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 MTSS1O43312 755 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 FSBPO95073 299 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 NPTXRO95502 500 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 PRLP01236 227 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 C6orf222P0C671 652 aaPredicted RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 EGR2P11161 476 aaPredicted RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 HSP90B1P14625 803 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 RARRES1P49788 294 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ZNF81P51508 661 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 BCAR1P56945 870 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 SUMO1P63165 101 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 SRSF4Q08170 494 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 FHL3Q13643 280 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 FAM209AQ5JX71 171 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 TTC38Q5R3I4 469 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 SLFN12LQ6IEE8 588 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ANKS3Q6ZW76 656 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 OVCH1Q7RTY7 1134 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 C1QL2Q7Z5L3 287 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ARHGEF25Q86VW2 580 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 PLXDC1Q8IUK5 500 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 CPEB3Q8NE35 698 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 OR52N2Q8NGI0 321 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 OR5AN1Q8NGI8 311 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ZNF669Q96BR6 464 aaPredicted RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 ZNF778Q96MU6 729 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 TUBGCP5Q96RT8 1024 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 DHRS4Q9BTZ2 278 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 C1QTNF7Q9BXJ2 289 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 CELF4Q9BZC1 486 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 OSBPL6Q9BZF3 934 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ENKD1Q9H0I2 346 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 SPON1Q9HCB6 807 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 KIAA1586Q9HCI6 787 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ALG13Q9NP73 1137 aaKnown RBP1.43□□□□□ -2.18
COPB1-212ENST00000534771 KMT5AQ9NQR1 393 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 SEMA4GQ9NTN9 838 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 ING3Q9NXR8 418 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 CLCA2Q9UQC9 943 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 COQ6Q9Y2Z9 468 aa1.43□□□□□ -2.18
COPB1-212ENST00000534771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 UBA6A0AVT1 1052 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 UNC119BA6NIH7 251 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 LRRC3CA6NJW4 275 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 PRR5-ARHGAP8B1AHC4 643 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 LEFTY2O00292 366 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 NRP1O14786 923 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 KLF4O43474 513 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 DIAPH1O60610 1272 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 EFCAB14O75071 495 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 PROP1O75360 226 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 CYP17A1P05093 508 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 SPATA31D3P0C874 917 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 ZBTB48P10074 688 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 ITGAMP11215 1152 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 DDX6P26196 483 aaKnown RBP eCLIP1.42□□□□□ -2.183e-6■■■□□ 19.2
COPB1-212ENST00000534771 CASRP41180 1078 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 FNTBP49356 437 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 WNT3AP56704 352 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 MXRA7P84157 204 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 IRF9Q00978 393 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 NHLH2Q02577 135 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 RESTQ13127 1097 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 MRPL49Q13405 166 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 TP53BP2Q13625 1128 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 ZNF169Q14929 603 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 ARHGAP44Q17R89 818 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 FAM214AQ32MH5 1076 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 PIK3R6Q5UE93 754 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 PRAMEF9Q5VWM5 478 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 KIAA1614Q5VZ46 1190 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 BSPRYQ5W0U4 402 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 ZNF425Q6IV72 752 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms