RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TBX3O15119 743 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 PFKFB2O60825 505 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 YWHABP31946 246 aaKnown RBP25.52■■□□□ 1.68
PKP3-210ENST00000533249 PTPN5P54829 565 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 VCPP55072 806 aaKnown RBP25.52■■□□□ 1.68
PKP3-210ENST00000533249 CYP4A11Q02928 519 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 GIT2Q14161 759 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 EMC2Q15006 297 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 XKR9Q5GH70 373 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 EARS2Q5JPH6 523 aaKnown RBP25.52■■□□□ 1.68
PKP3-210ENST00000533249 KREMEN2Q8NCW0 462 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 PHOX2BQ99453 314 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 RSAD1Q9HA92 442 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 DZANK1Q9NVP4 752 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 PPME1Q9Y570 386 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 IRAK3Q9Y616 596 aa25.52■■□□□ 1.68
PKP3-210ENST00000533249 FAM205CA6NFA0 338 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 ZBTB39O15060 712 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 DDHD2O94830 711 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 AFF1P51825 1210 aaKnown RBP25.51■■□□□ 1.67
PKP3-210ENST00000533249 CTTNQ14247 550 aaKnown RBP25.51■■□□□ 1.67
PKP3-210ENST00000533249 OTUD6AQ7L8S5 288 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 RNF149Q8NC42 400 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 VN1R3Q9BXE9 311 aa25.51■■□□□ 1.67
PKP3-210ENST00000533249 ORC3Q9UBD5 711 aaPredicted RBP25.51■■□□□ 1.67
PKP3-210ENST00000533249 CTDNEP1O95476 244 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 SSBP05455 408 aaKnown RBP eCLIP25.5■■□□□ 1.67
PKP3-210ENST00000533249 HOXA11P31270 313 aaPredicted RBP25.5■■□□□ 1.67
PKP3-210ENST00000533249 UBXN11Q5T124 520 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 ARID2Q68CP9 1835 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 MRPL10Q7Z7H8 261 aaKnown RBP25.5■■□□□ 1.67
PKP3-210ENST00000533249 SLC22A17Q8WUG5 538 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 TCP11Q8WWU5 503 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 FAM193BQ96PV7 902 aaPredicted RBP25.5■■□□□ 1.67
PKP3-210ENST00000533249 PRRX2Q99811 253 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 ZSWIM4Q9H7M6 989 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 MYO10Q9HD67 2058 aa25.5■■□□□ 1.67
PKP3-210ENST00000533249 BAG4O95429 457 aaKnown RBP25.49■■□□□ 1.67
PKP3-210ENST00000533249 PDGFBP01127 241 aaPredicted RBP25.49■■□□□ 1.67
PKP3-210ENST00000533249 POMCP01189 267 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 SPIRE1Q08AE8 756 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 NR5A1Q13285 461 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 PTPN14Q15678 1187 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 ATAT1Q5SQI0 421 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 KIAA1841Q6NSI8 718 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 TMC5Q6UXY8 1006 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 FERMT3Q86UX7 667 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 CABP7Q86V35 215 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 TPH2Q8IWU9 490 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 DBR1Q9UK59 544 aaKnown RBP25.49■■□□□ 1.67
PKP3-210ENST00000533249 SORCS3Q9UPU3 1222 aa25.49■■□□□ 1.67
PKP3-210ENST00000533249 CNTNAP2Q9UHC6 1331 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 SPDYE4A6NLX3 237 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 ASAP2O43150 1006 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 GAS2O43903 313 aaKnown RBP25.48■■□□□ 1.67
PKP3-210ENST00000533249 ERLIN2O94905 339 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 AVPR2P30518 371 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 TCF15Q12870 199 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 MTMR3Q13615 1198 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 SLFN12Q8IYM2 578 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 TDRD5Q8NAT2 981 aaKnown RBP25.48■■□□□ 1.67
PKP3-210ENST00000533249 FEZF2Q8TBJ5 459 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 WASF1Q92558 559 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 MTRQ99707 1265 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 KANSL3Q9P2N6 904 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 FAN1Q9Y2M0 1017 aa25.48■■□□□ 1.67
PKP3-210ENST00000533249 BRD1O95696 1058 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 ALDH2P05091 517 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 KRT2P35908 639 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 AK2P54819 239 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 PPFIBP1Q86W92 1011 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 SMOC2Q9H3U7 446 aa25.47■■□□□ 1.67
PKP3-210ENST00000533249 NRP1O14786 923 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 ASGR2P07307 311 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 ITGA4P13612 1032 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 NCLP19338 710 aaKnown RBP25.46■■□□□ 1.67
PKP3-210ENST00000533249 KLRC2P26717 231 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 UBALD2Q8IYN6 164 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 NECAB1Q8N987 351 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 KLHL5Q96PQ7 755 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 TMEM175Q9BSA9 504 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 EMILIN2Q9BXX0 1053 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 BRMS1Q9HCU9 246 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 XPNPEP1Q9NQW7 623 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 LIMD1Q9UGP4 676 aa25.46■■□□□ 1.67
PKP3-210ENST00000533249 TSPAN1O60635 241 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 SLITRK3O94933 977 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 CNPP09543 421 aaKnown RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 FDPSP14324 419 aaKnown RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 ANKRD1Q15327 319 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 SMG8Q8ND04 991 aaKnown RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 CPB2Q96IY4 423 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 EIF2AK1Q9BQI3 630 aaKnown RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 EIF2AQ9BY44 585 aaKnown RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 SFXN1Q9H9B4 322 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 PRG3Q9Y2Y8 225 aaPredicted RBP25.45■■□□□ 1.66
PKP3-210ENST00000533249 IPPQ9Y573 584 aa25.45■■□□□ 1.66
PKP3-210ENST00000533249 INO80B-WBP1J3KQ70 363 aa25.44■■□□□ 1.66
PKP3-210ENST00000533249 C2CD2LO14523 706 aa25.44■■□□□ 1.66
PKP3-210ENST00000533249 MXD4Q14582 209 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms