RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 RWDD4Q6NW29 188 aaKnown RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 TMEM35BQ8NCS4 154 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 BFSP2Q13515 415 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 VSTM4Q8IW00 320 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 TRAPPC12Q8WVT3 735 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 LGALS16A8MUM7 142 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 BTBD19C9JJ37 291 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 ENC1O14682 589 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 PDGFRBP09619 1106 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 CACNB2Q08289 660 aaPredicted RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 ALKBH5Q6P6C2 394 aaKnown RBP16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 COPS5Q92905 334 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 OSMRQ99650 979 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 C11orf70Q9BRQ4 267 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 FAM86B1E9PN63 330 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 SLC4A1P02730 911 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 KRT1P04264 644 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 FAM86B2P0C5J1 330 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 FSCN1Q16658 493 aaKnown RBP16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 TTC30AQ86WT1 665 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 NKRFO15226 690 aaKnown RBP eCLIP16.88■□□□□ 0.296e-9■■■□□ 18.6
PPFIA1-222ENST00000532504 KCNB1Q14721 858 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 DNAJC21Q5F1R6 531 aaKnown RBP16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 MTG1Q9BT17 334 aaPredicted RBP16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 HYOU1Q9Y4L1 999 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 LRRD1A4D1F6 860 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 ADCY8P40145 1251 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 DRAP1Q14919 205 aaPredicted RBP16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 GSDMBQ8TAX9 411 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 TGFB3P10600 412 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 PPARDQ03181 441 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 PPP2R3CQ969Q6 453 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 HINFPQ9BQA5 517 aa16.88■□□□□ 0.29
PPFIA1-222ENST00000532504 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 GNA15P30679 374 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 ANKS1AQ92625 1134 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 TMEM39AQ9NV64 488 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 RBP5P82980 135 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 PPP6R3Q5H9R7 873 aaPredicted RBP16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 DNAJB3Q8WWF6 145 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 IFT122Q9HBG6 1241 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 FEZ2Q9UHY8 353 aaPredicted RBP16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 FZD9O00144 591 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 PIK3R2O00459 728 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 FTCDO95954 541 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 PSMA2P25787 234 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 KIF11P52732 1056 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 GRB10Q13322 594 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 VEPH1Q14D04 833 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 MOXD1Q6UVY6 613 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 CXCL17Q6UXB2 119 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 CAPN12Q6ZSI9 719 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 UBE4BO95155 1302 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 EGFRP00533 1210 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 FLT3LGP49771 235 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 TATDN1Q6P1N9 297 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 APPL2Q8NEU8 664 aa16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 FNDC3AQ9Y2H6 1198 aaKnown RBP16.87■□□□□ 0.29
PPFIA1-222ENST00000532504 LRRC53A6NM62 1247 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GPR182O15218 404 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 DPYDQ12882 1025 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 TMEM150BA6NC51 233 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GRIK1P39086 918 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 ITIH3Q06033 890 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GRIK4Q16099 956 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 HSPH1Q92598 858 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 A0A087WZ62 844 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 MOCS2O96007 188 aaPredicted RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 Q4G0T1 1027 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 EARS2Q5JPH6 523 aaKnown RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 C1orf228Q6PIY5 440 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 SPRYD7Q5W111 196 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GABPB2Q8TAK5 448 aaPredicted RBP16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 CPB2Q96IY4 423 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 VPS37BQ9H9H4 285 aa16.86■□□□□ 0.29
PPFIA1-222ENST00000532504 GOLGA6CA6NDK9 693 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GOLGA6BA6NDN3 693 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 ELNP15502 786 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms