RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 TCP1P17987 556 aaKnown RBP13.36□□□□□ -0.27
CHD7-211ENST00000532149 CNGA1P29973 690 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 CYP2J2P51589 502 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 JAM2P57087 298 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 MYL7Q01449 175 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 MOGSQ13724 837 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 CLUL1Q15846 466 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 UGCGQ16739 394 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
CHD7-211ENST00000532149 IER5Q5VY09 327 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 PPP1R2P3Q6NXS1 205 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 C2orf69Q8N8R5 385 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 SCFD2Q8WU76 684 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 DHX38Q92620 1227 aaKnown RBP13.36□□□□□ -0.27
CHD7-211ENST00000532149 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 GUCA1BQ9UMX6 200 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 COQ4Q9Y3A0 265 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 REXO2Q9Y3B8 237 aaKnown RBP13.36□□□□□ -0.27
CHD7-211ENST00000532149 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 STYXL1Q9Y6J8 313 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
CHD7-211ENST00000532149 DENND3A2RUS2 1198 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
CHD7-211ENST00000532149 CES2O00748 559 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 ZNF862O60290 1169 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 CNMDO75829 334 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 CASP4P49662 377 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 KLK7P49862 253 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 NPEPPSP55786 919 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 RAPGEF1Q13905 1077 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 SURF1Q15526 300 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 NAB2Q15742 525 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
CHD7-211ENST00000532149 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
CHD7-211ENST00000532149 GPAT2Q6NUI2 795 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 ZPBP2Q6X784 338 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 CCDC60Q8IWA6 550 aaPredicted RBP13.35□□□□□ -0.27
CHD7-211ENST00000532149 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHD7-211ENST00000532149 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 NLRC4Q9NPP4 1024 aa13.35□□□□□ -0.27
CHD7-211ENST00000532149 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
CHD7-211ENST00000532149 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 ZNF233A6NK53 670 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 NKRFO15226 690 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHD7-211ENST00000532149 SLC16A4O15374 487 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 TADA3O75528 432 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 SOX5P35711 763 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 ARL2P36404 184 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 MFAP3P55082 362 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CNTN2Q02246 1040 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 NCBP1Q09161 790 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 KCNA1Q09470 495 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 GRM1Q13255 1194 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 TFDP1Q14186 410 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 EMC2Q15006 297 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 SNRNP35Q16560 246 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 EAPPQ56P03 285 aaPredicted RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 KRT39Q6A163 491 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 GPD1LQ8N335 351 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 DEPTORQ8TB45 409 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 EMID1Q96A84 441 aaPredicted RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 CRACR2AQ9BSW2 395 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 TMEM8AQ9HCN3 771 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
CHD7-211ENST00000532149 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
CHD7-211ENST00000532149 GSTTP1A0A1W2PQM5 241 aa13.33□□□□□ -0.28
CHD7-211ENST00000532149 RBM47A0AV96 593 aaKnown RBP13.33□□□□□ -0.28
CHD7-211ENST00000532149 K7ERI5 159 aa13.33□□□□□ -0.28
CHD7-211ENST00000532149 EPHB6O15197 1021 aa13.33□□□□□ -0.28
CHD7-211ENST00000532149 EXTL3O43909 919 aa13.33□□□□□ -0.28
CHD7-211ENST00000532149 HBP1O60381 514 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms