RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 LONRF3Q496Y0 759 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 N4BP2L1Q5TBK1 243 aaPredicted RBP19.78■□□□□ 0.76
PVT1-220ENST00000524165 TWF2Q6IBS0 349 aaKnown RBP19.78■□□□□ 0.76
PVT1-220ENST00000524165 MTSS1LQ765P7 747 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 NIPA1Q7RTP0 329 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 TEX2Q8IWB9 1127 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 URGCPQ8TCY9 931 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 MYL10Q9BUA6 226 aa19.78■□□□□ 0.76
PVT1-220ENST00000524165 MEIS3P2A8K0S8 358 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 DDAH1O94760 285 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 DDHD2O94830 711 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 MYBP10242 640 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 CD72P21854 359 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 TRMT1LQ7Z2T5 733 aaKnown RBP19.77■□□□□ 0.76
PVT1-220ENST00000524165 SRBD1Q8N5C6 995 aaKnown RBP19.77■□□□□ 0.76
PVT1-220ENST00000524165 NLRP7Q8WX94 980 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 FAM167AQ96KS9 214 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 FAM105AQ9NUU6 356 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 CDH7Q9ULB5 785 aa19.77■□□□□ 0.76
PVT1-220ENST00000524165 NRP1O14786 923 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 FOSP01100 380 aaPredicted RBP19.76■□□□□ 0.75
PVT1-220ENST00000524165 TDGF1P13385 188 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 KCNA4P22459 653 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 FSHRP23945 695 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 TARSP26639 723 aaKnown RBP19.76■□□□□ 0.75
PVT1-220ENST00000524165 GLUD2P49448 558 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 CDC42EP1Q00587 391 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 LPAL2Q16609 132 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 MAMSTRQ6ZN01 415 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 RNF168Q8IYW5 571 aaPredicted RBP19.76■□□□□ 0.75
PVT1-220ENST00000524165 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 IGDCC4Q8TDY8 1250 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 PGBD4Q96DM1 585 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 GCOM2Q9BZD3 368 aaPredicted RBP19.76■□□□□ 0.75
PVT1-220ENST00000524165 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
PVT1-220ENST00000524165 GAS2O43903 313 aaKnown RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 CSDE1O75534 798 aaKnown RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 PLEKHA8P1O95397 391 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 EFEMP2O95967 443 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 SPATA31D3P0C874 917 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 SFPQP23246 707 aaKnown RBP eCLIP19.75■□□□□ 0.75
PVT1-220ENST00000524165 MTAPQ13126 283 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 FZD5Q13467 585 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 PPP2R5DQ14738 602 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 IL31Q6EBC2 164 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 ZNF746Q6NUN9 644 aaPredicted RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 SPATA31D4Q6ZUB0 917 aa19.75■□□□□ 0.75
PVT1-220ENST00000524165 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 SMAP1Q8IYB5 467 aaPredicted RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 FAM193BQ96PV7 902 aaPredicted RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 FAM217BQ9NTX9 383 aaPredicted RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 MRPS17Q9Y2R5 130 aaKnown RBP19.75■□□□□ 0.75
PVT1-220ENST00000524165 TGM5O43548 720 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 GDF9O60383 454 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 PSAPP07602 524 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 DSG1Q02413 1049 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 TPRG1Q6ZUI0 275 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 TAS1R1Q7RTX1 841 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 NCOA7Q8NI08 942 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 IER2Q9BTL4 223 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 PIN4Q9Y237 131 aaKnown RBP19.74■□□□□ 0.75
PVT1-220ENST00000524165 GREB1Q4ZG55 1949 aa19.74■□□□□ 0.75
PVT1-220ENST00000524165 IPO5O00410 1097 aaKnown RBP19.73■□□□□ 0.75
PVT1-220ENST00000524165 ZNF76P36508 570 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 SREBF1P36956 1147 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 LIMK1P53667 647 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 ADCY1Q08828 1119 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 LILRA6Q6PI73 481 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 AGMOQ6ZNB7 445 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 PRR23BQ6ZRT6 265 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 PALB2Q86YC2 1186 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 PGBD1Q96JS3 809 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 ANO3Q9BYT9 981 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 INO80BQ9C086 356 aaPredicted RBP19.73■□□□□ 0.75
PVT1-220ENST00000524165 TBC1D22BQ9NU19 505 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 MARCH5Q9NX47 278 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 GABBR1Q9UBS5 961 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 ZMIZ1Q9ULJ6 1067 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 PCDHA10Q9Y5I2 948 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
PVT1-220ENST00000524165 F5P12259 2224 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 SETXQ7Z333 2677 aaKnown RBP19.73■□□□□ 0.75
PVT1-220ENST00000524165 IGF2RP11717 2491 aa19.73■□□□□ 0.75
PVT1-220ENST00000524165 SOBPA7XYQ1 873 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 ZMYND10O75800 440 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 CYP21A2P08686 494 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 PLA2G4DQ86XP0 818 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 GPR65Q8IYL9 337 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 FGF13Q92913 245 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 RIC8AQ9NPQ8 531 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.72■□□□□ 0.75
PVT1-220ENST00000524165 NRBP2Q9NSY0 501 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 CNTNAP2Q9UHC6 1331 aa19.72■□□□□ 0.75
PVT1-220ENST00000524165 TM4SF5O14894 197 aa19.71■□□□□ 0.75
PVT1-220ENST00000524165 ANTXR2P58335 489 aa19.71■□□□□ 0.75
PVT1-220ENST00000524165 HEATR3Q7Z4Q2 680 aa19.71■□□□□ 0.75
PVT1-220ENST00000524165 GRASPQ7Z6J2 395 aaPredicted RBP19.71■□□□□ 0.75
PVT1-220ENST00000524165 CMTR1Q8N1G2 835 aaKnown RBP19.71■□□□□ 0.75
PVT1-220ENST00000524165 PHF20Q9BVI0 1012 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms