RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 DDX3XO00571 662 aaKnown RBP eCLIP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 VILLO15195 856 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 PTPN4P29074 926 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 GTF2H1P32780 548 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 RGS2P41220 211 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 CLCN2P51788 898 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 ARFIP2P53365 341 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 TBC1D10CQ8IV04 446 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 FNDC8Q8TC99 324 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 PACSIN1Q9BY11 444 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 CADM1Q9BY67 442 aaKnown RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.35
SPIDR-217ENST00000522117 FAM196BA6NMK8 535 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 PSMA7O14818 248 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 PLSCR1O15162 318 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 GSTT2P0CG29 244 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 GSTT2BP0CG30 244 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 PIM1P11309 404 aaPredicted RBP12.9□□□□□ -0.35
SPIDR-217ENST00000522117 COL6A2P12110 1019 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 NFKBIAP25963 317 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 MAP3K10Q02779 954 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 DUPD1Q68J44 220 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 TRIM67Q6ZTA4 783 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 CROCCP2Q86T23 111 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 ANKRD42Q8N9B4 389 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 HSPBAP1Q96EW2 488 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.35
SPIDR-217ENST00000522117 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.35
SPIDR-217ENST00000522117 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 KLRC4O43908 158 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 IL4RP24394 825 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 DCTN2Q13561 401 aaKnown RBP12.89□□□□□ -0.35
SPIDR-217ENST00000522117 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 B3GNT6Q6ZMB0 384 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 OTUD6AQ7L8S5 288 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 ESR2Q92731 530 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 BHMTQ93088 406 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 GRAMD1AQ96CP6 724 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 LRRC37BQ96QE4 947 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 TAC1P20366 129 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 VPS41P49754 854 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 RASSF2P50749 326 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 PDE1BQ01064 536 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 PACS1Q6VY07 963 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPIDR-217ENST00000522117 NACC2Q96BF6 587 aa12.89□□□□□ -0.35
SPIDR-217ENST00000522117 DGCR14Q96DF8 476 aaKnown RBP12.89□□□□□ -0.35
SPIDR-217ENST00000522117 TUT1Q9H6E5 874 aaKnown RBP12.89□□□□□ -0.35
SPIDR-217ENST00000522117 TLR2O60603 784 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 FOXN2P32314 431 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 Q6ZNX1 250 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 ANKRD13BQ86YJ7 626 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 ZBED8Q8IZ13 594 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-217ENST00000522117 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 TIMMDC1Q9NPL8 285 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 SLIT3O75094 1523 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
SPIDR-217ENST00000522117 SERPINB8P50452 374 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 ZNF174Q15697 407 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 IL17AQ16552 155 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 PTPROQ16827 1216 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
SPIDR-217ENST00000522117 IZUMO2Q6UXV1 221 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
SPIDR-217ENST00000522117 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 DDX18Q9NVP1 670 aaKnown RBP12.88□□□□□ -0.35
SPIDR-217ENST00000522117 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
SPIDR-217ENST00000522117 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
SPIDR-217ENST00000522117 FOXO6A8MYZ6 492 aa12.87□□□□□ -0.35
SPIDR-217ENST00000522117 MAPK13O15264 365 aa12.87□□□□□ -0.35
SPIDR-217ENST00000522117 ZNF862O60290 1169 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms