RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 USP36Q9P275 1121 aaKnown RBP6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 DMRT1Q9Y5R6 373 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 HOXA3O43365 443 aaPredicted RBP6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 LY86O95711 162 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 PFKMP08237 780 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 PTGS2P35354 604 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 KPNA1P52294 538 aaPredicted RBP6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 SEPT7Q16181 437 aaKnown RBP6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 APBB1IPQ7Z5R6 666 aaPredicted RBP6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 PASD1Q8IV76 773 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 DHX37Q8IY37 1157 aaKnown RBP6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 HAS1Q92839 578 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 FERMT2Q96AC1 680 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 USP18Q9UMW8 372 aa6.12□□□□□ -1.43
CTHRC1-204ENST00000520880 SHROOM4Q9ULL8 1493 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 RAMP2O60895 175 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 CASRP41180 1078 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 DCAF17Q5H9S7 520 aaPredicted RBP6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 RHOUQ7L0Q8 258 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 APPBP2Q92624 585 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 SPTLC3Q9NUV7 552 aa6.11□□□□□ -1.43
CTHRC1-204ENST00000520880 ST20-MTHFSA0A0A6YYL1 179 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 PRSS38A1L453 326 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 NRP1O14786 923 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 FOXN1O15353 648 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 PHC1P78364 1004 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 GPR158Q5T848 1215 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 CXorf67Q86X51 503 aaPredicted RBP6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 MSL3Q8N5Y2 521 aaKnown RBP6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 ZNF610Q8N9Z0 462 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 OR5M3Q8NGP4 307 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 GAB3Q8WWW8 586 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 LENG9Q96B70 501 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 CPPED1Q9BRF8 314 aaPredicted RBP6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 CPEB1Q9BZB8 566 aaKnown RBP6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 SORCS3Q9UPU3 1222 aa6.1□□□□□ -1.43
CTHRC1-204ENST00000520880 ADCYAP1R1P41586 468 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 COL10A1Q03692 680 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 FSTL1Q12841 308 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 TERF2Q15554 542 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 LAIR1Q6GTX8 287 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 EPC1Q9H2F5 836 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 TMPRSS11EQ9UL52 423 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 PPP2R3BQ9Y5P8 575 aa6.09□□□□□ -1.43
CTHRC1-204ENST00000520880 ZFP36P26651 326 aaKnown RBP6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 SCNN1BP51168 640 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 NANOS3P60323 173 aaKnown RBP6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 TAS1R1Q7RTX1 841 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 LYSMD2Q8IV50 215 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 OR52N2Q8NGI0 321 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 CPT1CQ8TCG5 803 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 FZD1Q9UP38 647 aa6.08□□□□□ -1.44
CTHRC1-204ENST00000520880 A0A1W2PR48 441 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 TMEM191CA6NGB0 347 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 DNAJC6O75061 913 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 LSP1P33241 339 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 LSSP48449 732 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 GPR15P49685 360 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MANFP55145 182 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MGAT5Q09328 741 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MRPL49Q13405 166 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 SART3Q15020 963 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 DALRD3Q5D0E6 543 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MBNL2Q5VZF2 373 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 VRK3Q8IV63 474 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 SYNE4Q8N205 404 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 PDCD2LQ9BRP1 358 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 ANO3Q9BYT9 981 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 ZNF768Q9H5H4 540 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 EVLQ9UI08 416 aaPredicted RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 MYO15BQ96JP2 1530 aa6.07□□□□□ -1.44
CTHRC1-204ENST00000520880 AHRRA9YTQ3 701 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 CDC45O75419 566 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 SCAF4O95104 1147 aaKnown RBP6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 FKBP9O95302 570 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 ITGB1P05556 798 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 XPAP23025 273 aaPredicted RBP6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 WNT3AP56704 352 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 IL2P60568 153 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 OCRLQ01968 901 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 DUSP2Q05923 314 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 PPARAQ07869 468 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 VPS72Q15906 364 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 METTL24Q5JXM2 366 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 LMBR1LQ6UX01 489 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 LRRC55Q6ZSA7 311 aa6.06□□□□□ -1.44
CTHRC1-204ENST00000520880 FKBP9P1Q75LS8 142 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms