RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 PCDHB6Q9Y5E3 794 aa21.61■■□□□ 1.05
CCHCR1-230ENST00000513222 LINC01565O15544 149 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 ALDH7A1P49419 539 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 GNL2Q13823 731 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 RILPL1Q5EBL4 403 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 HAUS3Q68CZ6 603 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 RNF169Q8NCN4 708 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 SMG8Q8ND04 991 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 LPPQ93052 612 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 NRDE2Q9H7Z3 1164 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 UBN1Q9NPG3 1134 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 KANSL3Q9P2N6 904 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 IRAK3Q9Y616 596 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 ZMYM2Q9UBW7 1377 aa21.6■■□□□ 1.05
CCHCR1-230ENST00000513222 A0A1B0GUA9 196 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 MBTPS2O43462 519 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 NRIP1P48552 1158 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 SMAD4Q13485 552 aaKnown RBP21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 NBR1Q14596 966 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 IL17AQ16552 155 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 ECM1Q16610 540 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 NOTUMQ6P988 496 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 POTEGQ6S5H5 508 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 KCTD17Q8N5Z5 321 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 SMRP1Q8NCR6 262 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 PRIMPOLQ96LW4 560 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 CSRNP2Q9H175 543 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 POLR3FQ9H1D9 316 aaPredicted RBP21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 FZD8Q9H461 694 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 TLE6Q9H808 572 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 PCDHGC5Q9Y5F6 944 aa21.59■■□□□ 1.05
CCHCR1-230ENST00000513222 A0A087WWV3 80 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 ERLIN2O94905 339 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 GALTP07902 379 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 ARF4P18085 180 aaPredicted RBP21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 NCBP1Q09161 790 aaKnown RBP21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 MRPL43Q8N983 215 aaKnown RBP21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 RAB34Q9BZG1 259 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 RSAD1Q9HA92 442 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 STK39Q9UEW8 545 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 LRWD1Q9UFC0 647 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 CD207Q9UJ71 328 aa21.58■■□□□ 1.05
CCHCR1-230ENST00000513222 USO1O60763 962 aaKnown RBP21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 GJB2P29033 226 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 PBX3P40426 434 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 ZP2Q05996 745 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 CUL4AQ13619 759 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 PADI6Q6TGC4 694 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 DDX53Q86TM3 631 aaKnown RBP21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 ADHFE1Q8IWW8 467 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 GJD3Q8N144 294 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 VN1R2Q8NFZ6 395 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 IGSF21Q96ID5 467 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 CCDC43Q96MW1 224 aaKnown RBP21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 TCF25Q9BQ70 676 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 IGFLR1Q9H665 355 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 GPRC5CQ9NQ84 441 aa21.57■■□□□ 1.04
CCHCR1-230ENST00000513222 PI4K2BG5E9Z4 385 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 INO80B-WBP1J3KQ70 363 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 B4GALT3O60512 393 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 EFEMP2O95967 443 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 AFF1P51825 1210 aaKnown RBP21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 ATP2C1P98194 919 aaPredicted RBP21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 MICAL1Q8TDZ2 1067 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 TMEM175Q9BSA9 504 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 EIF2AQ9BY44 585 aaKnown RBP21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 IPPQ9Y573 584 aa21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.56■■□□□ 1.04
CCHCR1-230ENST00000513222 C2orf71A6NGG8 1288 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 CCT6AP40227 531 aaKnown RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 NAMPTP43490 491 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 DSC1Q08554 894 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 HYIQ5T013 277 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 ARL6IP4Q66PJ3 421 aaKnown RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 RBM23Q86U06 439 aaKnown RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 TMEM173Q86WV6 379 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 ZNF280BQ86YH2 543 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 KHSRPQ92945 711 aaKnown RBP eCLIP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 MMTAG2Q9BU76 263 aaKnown RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 C1QTNF1Q9BXJ1 281 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 CCDC113Q9H0I3 377 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 PRMT7Q9NVM4 692 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 GIT1Q9Y2X7 761 aa21.55■■□□□ 1.04
CCHCR1-230ENST00000513222 MYH11P35749 1972 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 TRIOO75962 3097 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 ARHGEF35A5YM69 484 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 DDHD2O94830 711 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 NDUFV1P49821 464 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 GIT2Q14161 759 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 SMC1AQ14683 1233 aaKnown RBP21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 SLC27A1Q6PCB7 646 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 DTHD1Q6ZMT9 781 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 GSTCDQ8NEC7 633 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 URGCPQ8TCY9 931 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 BSNDQ8WZ55 320 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 SUSD6Q92537 303 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 TMEM169Q96HH4 297 aa21.54■■□□□ 1.04
CCHCR1-230ENST00000513222 BACH2Q9BYV9 841 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms