RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HDGFL2Q7Z4V5 671 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 WDR66Q8TBY9 1149 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 NEIL1Q96FI4 390 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 PITHD1Q9GZP4 211 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 MTG2Q9H4K7 406 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 PCDHB6Q9Y5E3 794 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 MYPNQ86TC9 1320 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 UACAQ9BZF9 1416 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 GOLGA8BA8MQT2 603 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 TGM5O43548 720 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 OPHN1O60890 802 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 CNOT4O95628 575 aaKnown RBP5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 MTHFD2P13995 350 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 STAT5BP51692 787 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 HHEXQ03014 270 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 MYBPC3Q14896 1274 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 CYB5RLQ6IPT4 315 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 FAM180AQ6UWF9 173 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 SPATS2Q86XZ4 545 aaKnown RBP5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 GLB1L2Q8IW92 636 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 UBR7Q8N806 425 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 SLC16A11Q8NCK7 471 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 LRRC37BQ96QE4 947 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 UIMC1Q96RL1 719 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 SLC6A15Q9H2J7 730 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 C14orf93Q9H972 538 aaKnown RBP5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 OAZ3Q9UMX2 235 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 NUMBLQ9Y6R0 609 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 DISP1Q96F81 1524 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 IQGAP2Q13576 1575 aa5.62□□□□□ -1.51
HMGB3P13-201ENST00000511263 UHRF1BP1LA0JNW5 1464 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 NEMP1O14524 444 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 NRP1O14786 923 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 SUV39H1O43463 412 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 CDC14BO60729 498 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 KRT40Q6A162 431 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 LMBR1LQ6UX01 489 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 EGFL6Q8IUX8 553 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 RABGGTAQ92696 567 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 RAX2Q96IS3 184 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 ARAP1Q96P48 1450 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 DEF6Q9H4E7 631 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 RAI14Q9P0K7 980 aa5.61□□□□□ -1.51
HMGB3P13-201ENST00000511263 SLC26A4O43511 780 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 PCDH8O95206 1070 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 FSHBP01225 129 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 JUNP05412 331 aaKnown RBP5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 ZNF20P17024 532 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 TMPRSS15P98073 1019 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 SPIDRQ14159 915 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 STAT4Q14765 748 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 EFCAB2Q5VUJ9 269 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 LARP4Q71RC2 724 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 CXorf67Q86X51 503 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 PLA2G15Q8NCC3 412 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 OR14C36Q8NHC7 312 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 GAB3Q8WWW8 586 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 FAM89AQ96GI7 184 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 ZNF496Q96IT1 587 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 TERF2IPQ9NYB0 399 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 CTDP1Q9Y5B0 961 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P13-201ENST00000511263 MTUS2Q5JR59 1369 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 PHLDB1Q86UU1 1377 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 ADAM15Q13444 863 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 UGT8Q16880 541 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 POLNQ7Z5Q5 900 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 TAX1BP1Q86VP1 789 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 UNC5BQ8IZJ1 945 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 FRAT1Q92837 279 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 HAPLN2Q9GZV7 340 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 SCAND2PQ9GZW5 306 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 RCAN3Q9UKA8 241 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 ZHX1Q9UKY1 873 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 ZBTB21Q9ULJ3 1066 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 ISY1Q9ULR0 285 aaKnown RBP5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 USP18Q9UMW8 372 aa5.59□□□□□ -1.51
HMGB3P13-201ENST00000511263 PBRM1Q86U86 1689 aa5.59□□□□□ -1.52
HMGB3P13-201ENST00000511263 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 FYCO1Q9BQS8 1478 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 FHOD3Q2V2M9 1422 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 A0A1W2PRX2 142 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 C1QTNF3-AMACRE9PGA6 284 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 CYP27B1O15528 508 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 GPR39O43194 453 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 TSPY4P0CV99 314 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 TSPY10P0CW01 314 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 BPIFB4P59827 614 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms