RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 HYIQ5T013 277 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 CDCA2Q69YH5 1023 aaPredicted RBP26.69■■□□□ 1.86
SRPK1-210ENST00000508473 SMG8Q8ND04 991 aaKnown RBP26.69■■□□□ 1.86
SRPK1-210ENST00000508473 KIFAP3Q92845 792 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 CCDC51Q96ER9 411 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 IFT74Q96LB3 600 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 ZNF558Q96NG5 402 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 CSRNP2Q9H175 543 aa26.69■■□□□ 1.86
SRPK1-210ENST00000508473 PPP2R5AQ15172 486 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 CSPP1Q1MSJ5 1256 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 RINT1Q6NUQ1 792 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 EP400NLQ6ZTU2 488 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 AK8Q96MA6 479 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 APOL6Q9BWW8 343 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 NT5C3AQ9H0P0 336 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 C2orf40Q9H1Z8 148 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 RSAD1Q9HA92 442 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 PRMT7Q9NVM4 692 aaPredicted RBP26.68■■□□□ 1.86
SRPK1-210ENST00000508473 USP20Q9Y2K6 914 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 HES2Q9Y543 173 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 IPPQ9Y573 584 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 PCDHGC5Q9Y5F6 944 aa26.68■■□□□ 1.86
SRPK1-210ENST00000508473 HIP1RO75146 1068 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 HSP90AA1P07900 732 aaKnown RBP26.67■■□□□ 1.86
SRPK1-210ENST00000508473 ITGA4P13612 1032 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 NCLP19338 710 aaKnown RBP26.67■■□□□ 1.86
SRPK1-210ENST00000508473 MARCKSP29966 332 aaPredicted RBP26.67■■□□□ 1.86
SRPK1-210ENST00000508473 UBA7P41226 1012 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 KCNQ1P51787 676 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 PTPAQ15257 358 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 TMEM119Q4V9L6 283 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 C1orf186Q6ZWK4 172 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 MICAL1Q8TDZ2 1067 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 RNF39Q9H2S5 420 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 FZD8Q9H461 694 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 UBE2ZQ9H832 354 aaPredicted RBP26.67■■□□□ 1.86
SRPK1-210ENST00000508473 TBC1D13Q9NVG8 400 aa26.67■■□□□ 1.86
SRPK1-210ENST00000508473 TTLL13PA6NNM8 815 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 NT5C1B-RDH14C9J2C7 533 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 NPTXRO95502 500 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 AFF1P51825 1210 aaKnown RBP26.66■■□□□ 1.86
SRPK1-210ENST00000508473 BCAR1P56945 870 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 RNASELQ05823 741 aaKnown RBP26.66■■□□□ 1.86
SRPK1-210ENST00000508473 TMEM132AQ24JP5 1023 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 AAK1Q2M2I8 961 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 PPP4R3CPQ6ZMV5 832 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 SPRYD3Q8NCJ5 442 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 CNNM3Q8NE01 707 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 TRIM6Q9C030 488 aaPredicted RBP26.66■■□□□ 1.86
SRPK1-210ENST00000508473 GBP3Q9H0R5 595 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 IGFLR1Q9H665 355 aa26.66■■□□□ 1.86
SRPK1-210ENST00000508473 CCDC169A6NNP5 214 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 ZC3H11AO75152 810 aaKnown RBP eCLIP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 PRKCBP05771 671 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 PLA2G4BP0C869 781 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 KCNA5P22460 613 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 GTF2F1P35269 517 aaKnown RBP eCLIP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 LONP1P36776 959 aaKnown RBP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 UBE3AQ05086 875 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 RAD51AP2Q09MP3 1159 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 HYAL1Q12794 435 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 MAPK6Q16659 721 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 FOXD4L5Q5VV16 416 aaPredicted RBP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 DAW1Q8N136 415 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 URGCPQ8TCY9 931 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 FOXD4L4Q8WXT5 416 aaPredicted RBP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 CALML4Q96GE6 196 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 PRIMPOLQ96LW4 560 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 NXF3Q9H4D5 531 aaKnown RBP26.65■■□□□ 1.86
SRPK1-210ENST00000508473 NRDE2Q9H7Z3 1164 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 SPG21Q9NZD8 308 aa26.65■■□□□ 1.86
SRPK1-210ENST00000508473 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 A0A1B0GUA9 196 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 POMCP01189 267 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 PPM1AP35813 382 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 ALDH7A1P49419 539 aaKnown RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 PEX3P56589 373 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 ERVFC1P60507 584 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 PRPF4BQ13523 1007 aaKnown RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 KARSQ15046 597 aaKnown RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 FAM187BQ17R55 369 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 SPECC1Q5M775 1068 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 SLC27A1Q6PCB7 646 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 ADGRD2Q7Z7M1 963 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 SLC39A11Q8N1S5 342 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 SYT2Q8N9I0 419 aaPredicted RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 RASSF8Q8NHQ8 419 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 MRPS27Q92552 414 aaKnown RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 USP28Q96RU2 1077 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 CCDC113Q9H0I3 377 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 ZSCAN16Q9H4T2 348 aaPredicted RBP26.64■■□□□ 1.86
SRPK1-210ENST00000508473 TLR9Q9NR96 1032 aa26.64■■□□□ 1.86
SRPK1-210ENST00000508473 CNTNAP2Q9UHC6 1331 aa26.64■■□□□ 1.85
SRPK1-210ENST00000508473 SFI1A8K8P3 1242 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 EDN1P05305 212 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 SLC12A3P55017 1021 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 PLCB3Q01970 1234 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 MAPK7Q13164 816 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 ZNF280BQ86YH2 543 aa26.63■■□□□ 1.85
SRPK1-210ENST00000508473 RSPH1Q8WYR4 309 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms