RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PAPLNO95428 1278 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 GLUD1P00367 558 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 URODP06132 367 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 ADH1AP07327 375 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 LAMP2P13473 410 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 CIITAP33076 1130 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 HTR4Q13639 388 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 MTERF2Q49AM1 385 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 DCLRE1AQ6PJP8 1040 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 TAS1R1Q7RTX1 841 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 ST13P5Q8NFI4 369 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-236ENST00000498808 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 URGCPQ8TCY9 931 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 FAM217BQ9NTX9 383 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-236ENST00000498808 PCDHB2Q9Y5E7 798 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 MTCL1Q9Y4B5 1905 aaKnown RBP17.57■□□□□ 0.4
HDAC6-236ENST00000498808 PATJQ8NI35 1801 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 ESYT2A0FGR8 921 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 CHMP2AO43633 222 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 EDIL3O43854 480 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 ALDH2P05091 517 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 CDC27P30260 824 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 CATSPER4Q7RTX7 472 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 ZNF410Q86VK4 478 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 RNF168Q8IYW5 571 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-236ENST00000498808 PGBD4Q96DM1 585 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 SH2D3AQ9BRG2 576 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 INO80BQ9C086 356 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-236ENST00000498808 ZMYND12Q9H0C1 365 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 RSAD1Q9HA92 442 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 RXFP1Q9HBX9 757 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 SEPT9Q9UHD8 586 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-236ENST00000498808 NUMBLQ9Y6R0 609 aa17.57■□□□□ 0.4
HDAC6-236ENST00000498808 DOCK6Q96HP0 2047 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 MSH4O15457 936 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 ZBTB43O43298 467 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 STBD1O95210 358 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 EFEMP2O95967 443 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 ATXN1P54253 815 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 STARD6P59095 220 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 NECTIN1Q15223 517 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 VARS2Q5ST30 1063 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 KIAA0319Q5VV43 1072 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 GET4Q7L5D6 327 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 MRPL10Q7Z7H8 261 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 REXO1Q8N1G1 1221 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 NIFKQ9BYG3 293 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 UNC45AQ9H3U1 944 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 SUCLA2Q9P2R7 463 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 MYH15Q9Y2K3 1946 aa17.56■□□□□ 0.4
HDAC6-236ENST00000498808 MAP1BP46821 2468 aaKnown RBP17.56■□□□□ 0.4
HDAC6-236ENST00000498808 GOLGA8AA7E2F4 631 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 GOLGA8BA8MQT2 603 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 POMCP01189 267 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 GLUD2P49448 558 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 ZNF528Q3MIS6 628 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 ELMSAN1Q6PJG2 1045 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 GJA10Q969M2 543 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 NLRP4Q96MN2 994 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 FAM193BQ96PV7 902 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-236ENST00000498808 RPP25Q9BUL9 199 aaKnown RBP17.55■□□□□ 0.4
HDAC6-236ENST00000498808 NT5C3AQ9H0P0 336 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC6-236ENST00000498808 NCDNQ9UBB6 729 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 DPP7Q9UHL4 492 aa17.55■□□□□ 0.4
HDAC6-236ENST00000498808 CNTNAP2Q9UHC6 1331 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 SPTLC1O15269 473 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 SFNP31947 248 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 DNM2P50570 870 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 JAK3P52333 1124 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 XKR3Q5GH77 459 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 COLGALT2Q8IYK4 626 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 HDAC7Q8WUI4 952 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 RIT2Q99578 217 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 IFT122Q9HBG6 1241 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 KANSL3Q9P2N6 904 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 SSX2IPQ9Y2D8 614 aa17.54■□□□□ 0.4
HDAC6-236ENST00000498808 F8W810 466 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 GAS7O60861 476 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-236ENST00000498808 GPC5P78333 572 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 DSG1Q02413 1049 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 PALB2Q86YC2 1186 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 FGF14Q92915 247 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 DDX23Q9BUQ8 820 aaKnown RBP17.53■□□□□ 0.4
HDAC6-236ENST00000498808 TEKT3Q9BXF9 490 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 PRKD2Q9BZL6 878 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms