RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 NKX2-4Q9H2Z4 354 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 KMT5AQ9NQR1 393 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 KBTBD4Q9NVX7 518 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 RWDD3Q9Y3V2 267 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 TCHHQ07283 1943 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 K7ERI5 159 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 N4BP3O15049 544 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 FAM13AO94988 1023 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 PRKCBP05771 671 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
CPSF7-212ENST00000489728 GAP43P17677 238 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 NCKAP1LP55160 1127 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
CPSF7-212ENST00000489728 GIT2Q14161 759 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 SLC27A1Q6PCB7 646 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
CPSF7-212ENST00000489728 HACE1Q8IYU2 909 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 DDX12PQ92771 950 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 KCNH3Q9ULD8 1083 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
CPSF7-212ENST00000489728 LINC01553A4QN01 128 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 CCDC169A6NNP5 214 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 UPP2O95045 317 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 MYL1P05976 194 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 ARF4P18085 180 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 ERVK-21P61565 698 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TAP1Q03518 808 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 DHX8Q14562 1220 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 UBXN11Q5T124 520 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TMCO2Q7Z6W1 182 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 MRPL10Q7Z7H8 261 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 PDILTQ8N807 584 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TMEM161BQ8NDZ6 487 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 DHX58Q96C10 678 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 HVCN1Q96D96 273 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TGS1Q96RS0 853 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 MRPL9Q9BYD2 267 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 MRPL4Q9BYD3 311 aaKnown RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 TTYH1Q9H313 450 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-212ENST00000489728 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 HPSEQ9Y251 543 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 PCDHB2Q9Y5E7 798 aa12.2□□□□□ -0.46
CPSF7-212ENST00000489728 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 INPPL1O15357 1258 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 POLR2DO15514 142 aaKnown RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 B4GALT5O43286 388 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 TRAK2O60296 914 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 MYOGP15173 224 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 PFKFB1P16118 471 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 STRN3Q13033 797 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 ALCAMQ13740 583 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 DCAF4L1Q3SXM0 396 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 GLB1LQ6UWU2 654 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 ZPBP2Q6X784 338 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 FIBCD1Q8N539 461 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 DNAJC19Q96DA6 116 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 ADPGKQ9BRR6 497 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
CPSF7-212ENST00000489728 FNDC1Q4ZHG4 1894 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-212ENST00000489728 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 LCHNA4D1U4 455 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 MYMKA6NI61 221 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 SLC16A4O15374 487 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 PIGRP01833 764 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 RB1P06400 928 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 FAM178BQ8IXR5 827 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 CCDC65Q8IXS2 484 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 CCDC34Q96HJ3 373 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 CPB2Q96IY4 423 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 FIZ1Q96SL8 496 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 C7orf25Q9BPX7 421 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms