RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 DDX12PQ92771 950 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 LRCH3Q96II8 777 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 CCDC113Q9H0I3 377 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 KBTBD4Q9NVX7 518 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 CHD7Q9P2D1 2997 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 ADGRA3Q8IWK6 1321 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 A0A1B0GUA9 196 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 HOXA2O43364 376 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 TRAK2O60296 914 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF623O75123 536 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 EOMESO95936 686 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 ARF4P18085 180 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-219ENST00000479941 ABCD1P33897 745 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 NCKAP1LP55160 1127 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 PRPF4BQ13523 1007 aaKnown RBP11.93□□□□□ -0.5
ATG4B-219ENST00000479941 DYMQ7RTS9 669 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 CEP57L1Q8IYX8 460 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 SLC17A8Q8NDX2 589 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM161BQ8NDZ6 487 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 CNNM3Q8NE01 707 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 KCNN1Q92952 543 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 DNAJC19Q96DA6 116 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 KIFC3Q9BVG8 833 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 SLC28A3Q9HAS3 691 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 FAM105AQ9NUU6 356 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 USP25Q9UHP3 1055 aa11.93□□□□□ -0.5
ATG4B-219ENST00000479941 YBX2Q9Y2T7 364 aaKnown RBP11.93□□□□□ -0.5
ATG4B-219ENST00000479941 SLC16A4O15374 487 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 B4GALT5O43286 388 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 DGKIO75912 1065 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 CA3P07451 260 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 MYOGP15173 224 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 GAP43P17677 238 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 SYKP43405 635 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 STRN3Q13033 797 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 PPP2R2DQ66LE6 453 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 CNNM4Q6P4Q7 775 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 SLC27A1Q6PCB7 646 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
ATG4B-219ENST00000479941 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-219ENST00000479941 RSPH1Q8WYR4 309 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF689Q96CS4 500 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-219ENST00000479941 PGBD4Q96DM1 585 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 CPB2Q96IY4 423 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 RC3H2Q9HBD1 1191 aaKnown RBP11.92□□□□□ -0.5
ATG4B-219ENST00000479941 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
ATG4B-219ENST00000479941 FRMD3A2A2Y4 597 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 K7ENM7 598 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 N4BP3O15049 544 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 MAPTP10636 758 aaKnown RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 IDEP14735 1019 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 LIG1P18858 919 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 IBSPP21815 317 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 NDUFA8P51970 172 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 UBXN11Q5T124 520 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 TAS1R3Q7RTX0 852 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 STAMQ92783 540 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 FIZ1Q96SL8 496 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 C7orf25Q9BPX7 421 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 ADPGKQ9BRR6 497 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 TRIM6Q9C030 488 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-219ENST00000479941 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 OLFML3Q9NRN5 406 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 PCDHB2Q9Y5E7 798 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 TRANK1O15050 2925 aa11.91□□□□□ -0.5
ATG4B-219ENST00000479941 MYH11P35749 1972 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 LCHNA4D1U4 455 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 LINC01553A4QN01 128 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 MYL1P05976 194 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 GTF2BQ00403 316 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 BTG3Q14201 252 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 LONRF3Q496Y0 759 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 ATF7IP2Q5U623 682 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF720Q7Z2F6 126 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms