RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 UBXN11Q5T124 520 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 NT5DC1Q5TFE4 455 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 PAGE5Q96GU1 130 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 PRIMPOLQ96LW4 560 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 FIZ1Q96SL8 496 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 RAD9AQ99638 391 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 ZBED2Q9BTP6 218 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 TRAIPQ9BWF2 469 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 MAGEF1Q9HAY2 307 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
FDPS-210ENST00000474345 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
FDPS-210ENST00000474345 TLL1O43897 1013 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 TRAK2O60296 914 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 ZNF202O95125 648 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 IBSPP21815 317 aaPredicted RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 CASP1P29466 404 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 AFMP43652 599 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 HTRA4P83105 476 aaPredicted RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 TWF2Q6IBS0 349 aaKnown RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 NPAS4Q8IUM7 802 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
FDPS-210ENST00000474345 LRFN2Q9ULH4 789 aa16.7■□□□□ 0.26
FDPS-210ENST00000474345 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 ZNF623O75123 536 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 DGKIO75912 1065 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 EOMESO95936 686 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
FDPS-210ENST00000474345 IDEP14735 1019 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
FDPS-210ENST00000474345 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
FDPS-210ENST00000474345 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
FDPS-210ENST00000474345 CUL4BQ13620 913 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 RAB30Q15771 203 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 MRPL10Q7Z7H8 261 aaKnown RBP16.69■□□□□ 0.26
FDPS-210ENST00000474345 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 KCNN1Q92952 543 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 NKX2-4Q9H2Z4 354 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 MSRAQ9UJ68 235 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 INSL6Q9Y581 213 aa16.69■□□□□ 0.26
FDPS-210ENST00000474345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 GAP43P17677 238 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 SNW1Q13573 536 aaKnown RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 SFR1Q86XK3 245 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 FMR1NBQ8N0W7 255 aaPredicted RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 ZNF689Q96CS4 500 aaPredicted RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
FDPS-210ENST00000474345 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 PHLPP2Q6ZVD8 1323 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 CNTNAP2Q9UHC6 1331 aa16.68■□□□□ 0.26
FDPS-210ENST00000474345 H0YCG3 227 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 SKIP12755 728 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 DNAJB2P25686 324 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 GATMP50440 423 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 ASIC1P78348 528 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 GTF2BQ00403 316 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 SMG8Q8ND04 991 aaKnown RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 LPPQ93052 612 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 TARS2Q9BW92 718 aaKnown RBP16.67■□□□□ 0.26
FDPS-210ENST00000474345 STRA6Q9BX79 667 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 PDZD7Q9H5P4 517 aa16.67■□□□□ 0.26
FDPS-210ENST00000474345 RC3H2Q9HBD1 1191 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms