RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 MBTPS2O43462 519 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 NCLP19338 710 aaKnown RBP23.26■■□□□ 1.31
SREBF1-210ENST00000471445 PLPP4Q5VZY2 271 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 CDCA3Q99618 268 aaPredicted RBP23.26■■□□□ 1.31
SREBF1-210ENST00000471445 NRDE2Q9H7Z3 1164 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 TLE6Q9H808 572 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 RSAD1Q9HA92 442 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 CD207Q9UJ71 328 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 INPP5FQ9Y2H2 1132 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 CARNS1A5YM72 827 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 ZC3H11AO75152 810 aaKnown RBP eCLIP23.25■■□□□ 1.31
SREBF1-210ENST00000471445 GJB2P29033 226 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 KRT17Q04695 432 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 SMAD2Q15796 467 aaKnown RBP23.25■■□□□ 1.31
SREBF1-210ENST00000471445 CLUL1Q15846 466 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 NOTUMQ6P988 496 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 IGSF22Q8N9C0 903 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 SMG8Q8ND04 991 aaKnown RBP23.25■■□□□ 1.31
SREBF1-210ENST00000471445 CNNM3Q8NE01 707 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 NGRNQ9NPE2 291 aaKnown RBP23.25■■□□□ 1.31
SREBF1-210ENST00000471445 ENTPD7Q9NQZ7 604 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.25■■□□□ 1.31
SREBF1-210ENST00000471445 PRKAG3Q9UGI9 489 aa23.25■■□□□ 1.31
SREBF1-210ENST00000471445 LAD1O00515 517 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 PER2O15055 1255 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 EYA4O95677 639 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 ALDH7A1P49419 539 aaKnown RBP23.24■■□□□ 1.31
SREBF1-210ENST00000471445 ZP2Q05996 745 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 COASYQ13057 564 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 PTGDRQ13258 359 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 ECM1Q16610 540 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 CDCA2Q69YH5 1023 aaPredicted RBP23.24■■□□□ 1.31
SREBF1-210ENST00000471445 TMEM173Q86WV6 379 aaPredicted RBP23.24■■□□□ 1.31
SREBF1-210ENST00000471445 GJD3Q8N144 294 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 SMRP1Q8NCR6 262 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 VN1R2Q8NFZ6 395 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 CPB2Q96IY4 423 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 EIF2AQ9BY44 585 aaKnown RBP23.24■■□□□ 1.31
SREBF1-210ENST00000471445 LRWD1Q9UFC0 647 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 BARX2Q9UMQ3 279 aaPredicted RBP23.24■■□□□ 1.31
SREBF1-210ENST00000471445 IPPQ9Y573 584 aa23.24■■□□□ 1.31
SREBF1-210ENST00000471445 ARHGEF35A5YM69 484 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 NT5C1B-RDH14C9J2C7 533 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 B4GALT3O60512 393 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 ARF4P18085 180 aaPredicted RBP23.23■■□□□ 1.31
SREBF1-210ENST00000471445 CCT6AP40227 531 aaKnown RBP23.23■■□□□ 1.31
SREBF1-210ENST00000471445 PRPHP41219 470 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 KCNC3Q14003 757 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 PADI6Q6TGC4 694 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 PPP4R3CPQ6ZMV5 832 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 MAEAQ7L5Y9 396 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 URGCPQ8TCY9 931 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 KHSRPQ92945 711 aaKnown RBP eCLIP23.23■■□□□ 1.31
SREBF1-210ENST00000471445 TMEM169Q96HH4 297 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 CSRNP2Q9H175 543 aa23.23■■□□□ 1.31
SREBF1-210ENST00000471445 LRRIQ4A6NIV6 560 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 HIDE1A8MVS5 230 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 INPPL1O15357 1258 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 GALTP07902 379 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 CYP11B2P19099 503 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 RNASELQ05823 741 aaKnown RBP23.22■■□□□ 1.31
SREBF1-210ENST00000471445 PDIA5Q14554 519 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 ADHFE1Q8IWW8 467 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 BSNDQ8WZ55 320 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 IGSF21Q96ID5 467 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 RAB34Q9BZG1 259 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 ZBP1Q9H171 429 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 DNAJB4Q9UDY4 337 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 STK24Q9Y6E0 443 aa23.22■■□□□ 1.31
SREBF1-210ENST00000471445 B4GALT5O43286 388 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 SLC11A1P49279 550 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 AFF1P51825 1210 aaKnown RBP23.21■■□□□ 1.31
SREBF1-210ENST00000471445 RBM10P98175 930 aaKnown RBP23.21■■□□□ 1.31
SREBF1-210ENST00000471445 NCBP1Q09161 790 aaKnown RBP23.21■■□□□ 1.31
SREBF1-210ENST00000471445 SMC1AQ14683 1233 aaKnown RBP23.21■■□□□ 1.31
SREBF1-210ENST00000471445 MCTP1Q6DN14 999 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 TMEM184AQ6ZMB5 413 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 TMC7Q7Z402 723 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 ZNF280BQ86YH2 543 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 SNX29Q8TEQ0 813 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 BCL7CQ8WUZ0 217 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-210ENST00000471445 PRIMPOLQ96LW4 560 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 UBN1Q9NPG3 1134 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 KANSL3Q9P2N6 904 aa23.21■■□□□ 1.31
SREBF1-210ENST00000471445 C19orf67A6NJJ6 358 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 DDHD2O94830 711 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 ITGA4P13612 1032 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 SSTR3P32745 418 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-210ENST00000471445 IL17AQ16552 155 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 FAM187BQ17R55 369 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 ZBTB8OSQ8IWT0 167 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 TMEM175Q9BSA9 504 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 BHMT2Q9H2M3 363 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 EPHX3Q9H6B9 360 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 PRMT7Q9NVM4 692 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-210ENST00000471445 SMC3Q9UQE7 1217 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 HES2Q9Y543 173 aa23.2■■□□□ 1.3
SREBF1-210ENST00000471445 ZMYM2Q9UBW7 1377 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms