RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RAD9BQ6WBX8 426 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 UBE2Q2Q8WVN8 375 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 IRX2Q9BZI1 471 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-203ENST00000467558 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 GIPC1O14908 333 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.05
BRAT1-203ENST00000467558 RHBDL3P58872 404 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-203ENST00000467558 AGPAT1Q99943 283 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 NUP85Q9BW27 656 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 SUCLA2Q9P2R7 463 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-203ENST00000467558 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 HUS1O60921 280 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 MED24O75448 989 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 EMC2Q15006 297 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CYP4F22Q6NT55 531 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 DARS2Q6PI48 645 aaKnown RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CCNYQ8ND76 341 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 HVCN1Q96D96 273 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 RASSF4Q9H2L5 321 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 HDAC6Q9UBN7 1215 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 FAN1Q9Y2M0 1017 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 MYBL1P10243 752 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 GABPAQ06546 454 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 TTC31Q49AM3 519 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 FKBP1CQ5VVH2 108 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 RAB3IL1Q8TBN0 382 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 HGSO14964 777 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 INHBAP08476 426 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 NPEPPSP55786 919 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CEP57Q86XR8 500 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 INTS9Q9NV88 658 aaKnown RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 KLHL14Q9P2G3 628 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 MAGEB2O15479 319 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 Q4G0T1 1027 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CCDC62Q6P9F0 684 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 SPATS2Q86XZ4 545 aaKnown RBP14.76□□□□□ -0.05
BRAT1-203ENST00000467558 PPM1EQ8WY54 764 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 CCT6BQ92526 530 aa14.76□□□□□ -0.05
BRAT1-203ENST00000467558 ATP1A1P05023 1023 aaKnown RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 BASP1P80723 227 aaKnown RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.75□□□□□ -0.058e-8■■□□□ 14.3
BRAT1-203ENST00000467558 UNC45AQ9H3U1 944 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 NCK2O43639 380 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 BUB1BO60566 1050 aaPredicted RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 ACTN1P12814 892 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 SLC9A1P19634 815 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 SCP2P22307 547 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 CDC42EP1Q00587 391 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 TFDP2Q14188 446 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 CFAP57Q96MR6 1250 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 P4HA2O15460 535 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 PRPSAP1Q14558 356 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 CRY2Q49AN0 593 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 CC2D1AQ6P1N0 951 aaPredicted RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 PNMA8AQ86V59 439 aaPredicted RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 TTC13Q8NBP0 860 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 PARK7Q99497 189 aaKnown RBP14.75□□□□□ -0.05
BRAT1-203ENST00000467558 SNX12Q9UMY4 172 aa14.75□□□□□ -0.05
BRAT1-203ENST00000467558 TNPO2O14787 897 aaKnown RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ASAP2O43150 1006 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 CYP26A1O43174 497 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 CYTH3O43739 400 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 CRCPO75575 148 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 GH1P01241 217 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ZNF18P17022 549 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ACOT2P49753 483 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ITKQ08881 620 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 TTI2Q6NXR4 508 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 BZW1Q7L1Q6 419 aaKnown RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ASNSD1Q9NWL6 643 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 EVI5O60447 810 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 RTN2O75298 545 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 TRIP13Q15645 432 aaPredicted RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 NBPF12Q5TAG4 269 aaPredicted RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 CENPPQ6IPU0 288 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ZWILCHQ9H900 591 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 SLC12A6Q9UHW9 1150 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 PPP2R3BQ9Y5P8 575 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 WNT10BO00744 389 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 SART1O43290 800 aaKnown RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 VCAM1P19320 739 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 MRPS25P82663 173 aaKnown RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 TAF1CQ15572 869 aaPredicted RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 GRIK5Q16478 980 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 LMBRD2Q68DH5 695 aaPredicted RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 GPRC5AQ8NFJ5 357 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 KIAA1683Q9H0B3 1180 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ADARB2Q9NS39 739 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms